Bo3g162600 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo3g162600 T031146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.894 0.939
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g162600.1 bHLH 33 81

Links

Other bHLH family TFs
Other Brassica oleracea TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005911 Calypte anna Aan_R005911 N
Aan_R005912 Calypte anna Aan_R005912 N
Afo_R003312 Aptenodytes forsteri Afo_R003312 N
Afo_R003313 Aptenodytes forsteri Afo_R003313 N
Alligator_sinensis_CCG011592.1 Alligator sinensis Alligator_sinensis_CCG011592.1 N
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N
Brh_R011661 Buceros rhinoceros Brh_R011661 N
Brh_R011662 Buceros rhinoceros Brh_R011662 N
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N
ENSFALG00000009558 Ficedula albicollis ENSFALG00000009558 N
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N
ENSGALG00000027002 Gallus gallus ENSGALG00000027002 N
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N
ENSMGAG00000002000 Meleagris gallopavo ENSMGAG00000002000 N
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N
ENSPSIG00000004058 Pelodiscus sinensis ENSPSIG00000004058 N
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N
ENSSHAG00000014651 Sarcophilus harrisii ENSSHAG00000014651 N
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N
ENSTGUG00000002877 Taeniopygia guttata ENSTGUG00000002877 N
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N
Gfo_R009738 Geospiza fortis Gfo_R009738 N
Gfo_R009739 Geospiza fortis Gfo_R009739 N
Pvit_15590 Pogona vitticeps Pvit_15590 N
Pvit_15591 Pogona vitticeps Pvit_15591 N
Tal_R007853 Tyto alba Tal_R007853 N
Tal_R007854 Tyto alba Tal_R007854 N