CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEUROG3
(
Bos taurus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSBTAG00000006431
T033059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NEUROG2
M02799_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_1
0.866
0.904
NEUROG2
M02800_2.00
Homo sapiens
RMCATATGBY
RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_2
0.866
0.904
NEUROG2
M04179_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX
0.866
0.904
NEUROG2
M04181_2.00
Homo sapiens
RVCATRTGBY
RVCAYATGBY
SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX
0.866
0.904
Neurog2
M08758_2.00
Mus musculus
VBRRCAGATGGB
VCCATCTGYYVB
Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C
0.866
0.904
NEUROG2
M09879_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NGN2_Q3
0.866
0.904
NEUROG2
M04180_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX
0.866
0.904
NEUROG2
M04182_2.00
Homo sapiens
RMCRTRTGYY
RRCAYAYGKY
SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX
0.866
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000008432
bHLH
84
136
RRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALT
Links
Other
bHLH
family TFs
Other
Bos taurus
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400023206
Solanum tuberosum
PGSC0003DMG400023206
I
Solyc10g055250.1
Solanum lycopersicum
Solyc10g055250.1
I
VIT_03s0038g02130
Vitis vinifera
VIT_03s0038g02130
I