arntl1a (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000006791 T033626_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000004223 bHLH 77 130
ENSDARP00000124722 bHLH 77 130

Links

Other bHLH family TFs
Other Danio rerio TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG009080.1 Alligator sinensis Alligator_sinensis_CCG009080.1 N
Cmyd_10016724 Chelonia mydas Cmyd_10016724 N
ENSACAG00000024733 Anolis carolinensis ENSACAG00000024733 N
ENSAMEG00000018149 Ailuropoda melanoleuca ENSAMEG00000018149 N
ENSAPLG00000007392 Anas platyrhynchos ENSAPLG00000007392 N
ZFPM1 Bos taurus ENSBTAG00000015766 N
ENSCAFG00000032382 Canis familiaris ENSCAFG00000032382 N
ENSCJAG00000012840 Callithrix jacchus ENSCJAG00000012840 N
ENSCSAG00000003107 Chlorocebus sabaeus ENSCSAG00000003107 N
ENSDNOG00000040837 Dasypus novemcinctus ENSDNOG00000040837 N
ENSDORG00000008940 Dipodomys ordii ENSDORG00000008940 N
ENSFALG00000006492 Ficedula albicollis ENSFALG00000006492 N
ZFPM1 Homo sapiens ENSG00000179588 N
ZFPM1 Gallus gallus ENSGALG00000006099 N
ZFPM1 Loxodonta africana ENSLAFG00000013561 N
ENSMGAG00000007619 Meleagris gallopavo ENSMGAG00000007619 N
ENSMLUG00000029422 Myotis lucifugus ENSMLUG00000029422 N
ENSMPUG00000008220 Mustela putorius furo ENSMPUG00000008220 N
Zfpm1 Mus musculus ENSMUSG00000049577 N
ZFPM1 Otolemur garnettii ENSOGAG00000028472 N
ENSP00000326630-D1 Bos grunniens ENSP00000326630-D1 N
ENSPANG00000005497 Papio anubis ENSPANG00000005497 N
ZFPM1 Pteropus vampyrus ENSPVAG00000005587 N
Zfpm1 Rattus norvegicus ENSRNOG00000043077 N
ENSSTOG00000027139 Ictidomys tridecemlineatus ENSSTOG00000027139 N
ENSTGUG00000007708 Taeniopygia guttata ENSTGUG00000007708 N
ZFPM1 Tursiops truncatus ENSTTRG00000014484 N
Myotis_brandtii_ZFPM1_10035266 Myotis brandtii Myotis_brandtii_ZFPM1_10035266 N
Ogr16761 Ophisaurus gracilis Ogr16761 N
Pvit_16331 Pogona vitticeps Pvit_16331 N