arntl1b (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000035732 T033674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000051822 bHLH 76 129
ENSDARP00000089031 bHLH 99 152
ENSDARP00000095296 bHLH 98 151
ENSDARP00000114569 bHLH 75 128

Links

Other bHLH family TFs
Other Danio rerio TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I
AALB007752 Anopheles albimanus AALB007752 I
Aan_R002212 Calypte anna Aan_R002212 I
Aan_R005895 Calypte anna Aan_R005895 I
Aan_R007315 Calypte anna Aan_R007315 I
AATE002063 Anopheles atroparvus AATE002063 I
ACEP16400 Atta cephalotes ACEP16400 I
Afo_R004888 Aptenodytes forsteri Afo_R004888 I
Afo_R008955 Aptenodytes forsteri Afo_R008955 I
Afo_R012718 Aptenodytes forsteri Afo_R012718 I
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I
ASTEI07771 Anopheles stephensi ASTEI07771 I
Brh_R000794 Buceros rhinoceros Brh_R000794 I
Brh_R001637 Buceros rhinoceros Brh_R001637 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I
RUNX2 Anolis carolinensis ENSACAG00000013003 I
RUNX3 Anolis carolinensis ENSACAG00000017855 I
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I
RUNX2 Bos taurus ENSBTAG00000004104 I
RUNX1 Bos taurus ENSBTAG00000004742 I
RUNX3 Bos taurus ENSBTAG00000019800 I
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I
RUNX1 Canis familiaris ENSCAFG00000009596 I
RUNX3 Canis familiaris ENSCAFG00000012903 I
ENSCING00000002253 Ciona intestinalis ENSCING00000002253 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
RUNX3 Callithrix jacchus ENSCJAG00000020815 I
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I
RUNX2 Cavia porcellus ENSCPOG00000005277 I
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I
runx2a Danio rerio ENSDARG00000040261 I
runx3 Danio rerio ENSDARG00000052826 I
runx2b Danio rerio ENSDARG00000059233 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I
Runx1 Dipodomys ordii ENSDORG00000004347 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX2 Equus caballus ENSECAG00000020875 I
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I
RUNX3 Felis catus ENSFCAG00000000680 I
RUNX2 Felis catus ENSFCAG00000022480 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
RUNX3 Homo sapiens ENSG00000020633 D
RUNX2 Homo sapiens ENSG00000124813 D
RUNX1 Homo sapiens ENSG00000159216 D
runx3 Gasterosteus aculeatus ENSGACG00000007301 I
runx2b Gasterosteus aculeatus ENSGACG00000012322 I
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I
RUNX1 Gallus gallus ENSGALG00000016022 I
ENSGALG00000026484 Gallus gallus ENSGALG00000026484 I
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I
RUNX3 Gorilla gorilla ENSGGOG00000004848 I
RUNX1 Gorilla gorilla ENSGGOG00000012862 I
RUNX2 Gorilla gorilla ENSGGOG00000012890 I
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
RUNX1 Loxodonta africana ENSLAFG00000004290 I
RUNX2 Loxodonta africana ENSLAFG00000005054 I
RUNX3 Loxodonta africana ENSLAFG00000008382 I
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I
RUNX1 Microcebus murinus ENSMICG00000011998 I
RUNX2 Myotis lucifugus ENSMLUG00000000514 I
RUNX3 Myotis lucifugus ENSMLUG00000003395 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX3 Macaca mulatta ENSMMUG00000002420 I
RUNX2 Macaca mulatta ENSMMUG00000019819 I
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I
RUNX2 Monodelphis domestica ENSMODG00000018912 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
ENSMPUG00000012508 Mustela putorius furo ENSMPUG00000012508 I
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I
Runx1 Mus musculus ENSMUSG00000022952 D
Runx2 Mus musculus ENSMUSG00000039153 D
Runx3 Mus musculus ENSMUSG00000070691 D
ENSNLEG00000003611 Nomascus leucogenys ENSNLEG00000003611 I
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I
ENSOARG00000013599 Ovis aries ENSOARG00000013599 I
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I
RUNX2 Otolemur garnettii ENSOGAG00000003900 I
RUNX3 Otolemur garnettii ENSOGAG00000025633 I
RUNX1 Otolemur garnettii ENSOGAG00000033362 I
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I
ENSONIG00000004914 Oreochromis niloticus ENSONIG00000004914 I
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I
RUNX2 Ochotona princeps ENSOPRG00000002943 I
RUNX3 Ochotona princeps ENSOPRG00000011273 I
runx3 Oryzias latipes ENSORLG00000017515 I
ENSP00000300305 Macaca fascicularis ENSP00000300305 I
ENSP00000352514 Macaca fascicularis ENSP00000352514 I
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I
RUNX3 Pan troglodytes ENSPTRG00000000351 I
RUNX1 Pan troglodytes ENSPTRG00000013883 I
RUNX2 Pan troglodytes ENSPTRG00000018228 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx1 Rattus norvegicus ENSRNOG00000001704 I
Runx2 Rattus norvegicus ENSRNOG00000020193 I
Runx3 Rattus norvegicus ENSRNOG00000054217 I
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I
RUNX2 Tupaia belangeri ENSTBEG00000000948 I
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
runx3 Takifugu rubripes ENSTRUG00000001517 I
runx2 Takifugu rubripes ENSTRUG00000003501 I
runx1 Takifugu rubripes ENSTRUG00000012611 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
RUNX2 Tursiops truncatus ENSTTRG00000006943 I
RUNX3 Tursiops truncatus ENSTTRG00000009396 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I
GK25373 Drosophila willistoni FBgn0227332 I
Gfo_R000714 Geospiza fortis Gfo_R000714 I
Gfo_R011596 Geospiza fortis Gfo_R011596 I
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I
MCINX000302 Melitaea cinxia MCINX000302 I
MESCA007078 Megaselia scalaris MESCA007078 I
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I
NV11000 Nasonia vitripennis NV11000 I
Ogr17914 Ophisaurus gracilis Ogr17914 I
PPAI006591 Phlebotomus papatasi PPAI006591 I
Pvit_01165 Pogona vitticeps Pvit_01165 I
Pvit_04762 Pogona vitticeps Pvit_04762 I
Pvit_17193 Pogona vitticeps Pvit_17193 I
RPRC005391 Rhodnius prolixus RPRC005391 I
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I
SINV13317 Solenopsis invicta SINV13317 I
Tal_R011874 Tyto alba Tal_R011874 I
TC005566 Tribolium castaneum TC005566 I
TC005796 Tribolium castaneum TC005796 I
TC006536 Tribolium castaneum TC006536 I
tetur01g02340 Tetranychus urticae tetur01g02340 I
runx2 Xenopus tropicalis XB-GENE-482021 I
runx3 Xenopus tropicalis XB-GENE-487784 I
runx3.L Xenopus laevis XB-GENE-6487158 I
runx2.L Xenopus laevis XB-GENE-864817 I
runx1.L Xenopus laevis XB-GENE-864949 I
XP_002165633.1 Hydra magnipapillata XP_002165633.1 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I
XP_002939388 Xenopus tropicalis XP_002939388 I
YQE_12218 Dendroctonus ponderosae YQE_12218 I