arntl1a (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000019370 T036479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000024118 bHLH 93 146
ENSORLP00000024120 bHLH 75 128

Links

Other bHLH family TFs
Other Oryzias latipes TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006598 Calypte anna Aan_R006598 I 0.914
Afo_R014608 Aptenodytes forsteri Afo_R014608 I 0.914
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I 0.914
Brh_R010633 Buceros rhinoceros Brh_R010633 I 0.914
CGI_10025278 Crassostrea gigas CGI_10025278 I 0.858
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I 0.914
ARNTL Anolis carolinensis ENSACAG00000004497 I 0.914
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I 0.914
ENSAMXG00000010089 Astyanax mexicanus ENSAMXG00000010089 I 0.871
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I 0.912
ENSAMXG00000020233 Astyanax mexicanus ENSAMXG00000020233 I 0.839
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I 0.914
ARNTL Bos taurus ENSBTAG00000013029 I 0.914
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I 0.914
ARNTL Canis familiaris ENSCAFG00000008095 I 0.914
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I 0.914
ARNTL Callithrix jacchus ENSCJAG00000010162 I 0.914
ARNTL Cavia porcellus ENSCPOG00000008795 I 0.914
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I 0.914
arntl1a Danio rerio ENSDARG00000006791 I 0.914
arntl1b Danio rerio ENSDARG00000035732 I 0.914
arntl2 Danio rerio ENSDARG00000041381 I 0.839
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I 0.914
Arntl Dipodomys ordii ENSDORG00000015539 I 0.914
ARNTL Equus caballus ENSECAG00000012118 I 0.914
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I 0.914
ARNTL Felis catus ENSFCAG00000010983 I 0.914
ARNTL Homo sapiens ENSG00000133794 D 0.914
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I 0.914
ARNTL Gallus gallus ENSGALG00000005378 I 0.914
ARNTL Gorilla gorilla ENSGGOG00000013211 I 0.914
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I 0.914
ENSLACG00000004629 Latimeria chalumnae ENSLACG00000004629 I 0.871
ARNTL Loxodonta africana ENSLAFG00000026673 I 0.914
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I 0.914
ARNTL Meleagris gallopavo ENSMGAG00000005349 I 0.914
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I 0.914
ARNTL Myotis lucifugus ENSMLUG00000008503 I 0.914
ARNTL Macaca mulatta ENSMMUG00000009690 I 0.914
ARNTL Monodelphis domestica ENSMODG00000008708 I 0.914
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I 0.914
Arntl Mus musculus ENSMUSG00000055116 D 0.914
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I 0.914
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I 0.914
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I 0.914
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I 0.914
ARNTL Otolemur garnettii ENSOGAG00000000736 I 0.914
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I 0.914
ENSONIG00000014665 Oreochromis niloticus ENSONIG00000014665 I 0.839
ARNTL Ochotona princeps ENSOPRG00000004853 I 0.914
arntl2 Oryzias latipes ENSORLG00000010946 I 0.839
ENSP00000384517 Macaca fascicularis ENSP00000384517 I 0.914
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I 0.914
ENSPFOG00000016287 Poecilia formosa ENSPFOG00000016287 I 0.839
ENSPMAG00000004171 Petromyzon marinus ENSPMAG00000004171 I 0.868
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I 0.914
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I 0.914
ARNTL Pan troglodytes ENSPTRG00000003376 I 0.914
ARNTL Pteropus vampyrus ENSPVAG00000006712 I 0.914
Arntl Rattus norvegicus ENSRNOG00000014448 D 0.914
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I 0.914
ARNTL Sus scrofa ENSSSCG00000013397 I 0.914
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I 0.914
ARNTL Tupaia belangeri ENSTBEG00000017387 I 0.914
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I 0.914
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I 0.914
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I 0.914
arntl2 Tetraodon nigroviridis ENSTNIG00000012142 I 0.839
arntl2 Takifugu rubripes ENSTRUG00000007832 I 0.839
arntl1a Takifugu rubripes ENSTRUG00000008391 I 0.914
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I 0.914
ARNTL Tursiops truncatus ENSTTRG00000013925 I 0.914
ARNTL Vicugna pacos ENSVPAG00000005926 I 0.914
ENSXMAG00000001482 Xiphophorus maculatus ENSXMAG00000001482 I 0.839
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I 0.914
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I 0.879
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I 0.879
Gfo_R013617 Geospiza fortis Gfo_R013617 I 0.914
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I 0.914
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I 0.858
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I 0.858
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I 0.879
Ogr18318 Ophisaurus gracilis Ogr18318 I 0.914
Pvit_10294 Pogona vitticeps Pvit_10294 I 0.914
Tal_R003521 Tyto alba Tal_R003521 I 0.914
arntl.L Xenopus laevis XB-GENE-17342306 I 0.914
arntl Xenopus tropicalis XB-GENE-495455 I 0.914
arntl.S Xenopus laevis XB-GENE-495459 I 0.914