FERD3L (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000017777 T037795_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.852 0.904
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.852 0.904
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.852 0.904
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.852 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020929 bHLH 70 122

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001045 Calypte anna Aan_R001045 I 0.852
Afo_R003467 Aptenodytes forsteri Afo_R003467 I 0.852
Alligator_sinensis_CCG002586.1 Alligator sinensis Alligator_sinensis_CCG002586.1 I 0.852
Brh_R002964 Buceros rhinoceros Brh_R002964 I 0.852
Cmyd_10011491 Chelonia mydas Cmyd_10011491 I 0.852
ENSACAG00000011821 Anolis carolinensis ENSACAG00000011821 I 0.888
ENSAMEG00000019030 Ailuropoda melanoleuca ENSAMEG00000019030 I 0.852
ENSAMXG00000025611 Astyanax mexicanus ENSAMXG00000025611 I 0.888
ENSAPLG00000001417 Anas platyrhynchos ENSAPLG00000001417 I 0.852
FERD3L Bos taurus ENSBTAG00000039955 I 0.852
FERD3L Canis familiaris ENSCAFG00000002506 I 0.852
ENSCSAG00000019609 Chlorocebus sabaeus ENSCSAG00000019609 I 0.852
ferd3l Danio rerio ENSDARG00000092160 I 0.888
FERD3L Dasypus novemcinctus ENSDNOG00000037813 I 0.852
Ferd3l Dipodomys ordii ENSDORG00000012867 I 0.852
FERD3L Equus caballus ENSECAG00000002518 I 0.852
FERD3L Erinaceus europaeus ENSEEUG00000004309 I 0.852
ENSFALG00000014487 Ficedula albicollis ENSFALG00000014487 I 0.852
FERD3L Felis catus ENSFCAG00000010289 I 0.852
FERD3L Homo sapiens ENSG00000146618 D 0.852
FERD3L Gasterosteus aculeatus ENSGACG00000006421 I 0.914
FERD3L Gallus gallus ENSGALG00000010862 I 0.852
FERD3L Gorilla gorilla ENSGGOG00000021943 I 0.852
ENSLACG00000013215 Latimeria chalumnae ENSLACG00000013215 I 0.852
FERD3L Loxodonta africana ENSLAFG00000012782 I 0.852
ENSLOCG00000018351 Lepisosteus oculatus ENSLOCG00000018351 I 0.888
FERD3L Meleagris gallopavo ENSMGAG00000015843 I 0.852
ENSMICG00000010110 Microcebus murinus ENSMICG00000010110 I 0.852
FERD3L Myotis lucifugus ENSMLUG00000006930 I 0.852
FERD3L Macaca mulatta ENSMMUG00000011174 I 0.852
Ferd3l Mus musculus ENSMUSG00000046518 I 0.852
ENSNLEG00000019265 Nomascus leucogenys ENSNLEG00000019265 I 0.852
FERD3L Ornithorhynchus anatinus ENSOANG00000009615 I 0.852
ENSOARG00000008159 Ovis aries ENSOARG00000008159 I 0.852
FERD3L Oryctolagus cuniculus ENSOCUG00000016121 I 0.852
FERD3L Otolemur garnettii ENSOGAG00000014773 I 0.852
FERD3L Ochotona princeps ENSOPRG00000004265 I 0.852
FERD3L Oryzias latipes ENSORLG00000004008 I 0.888
ENSP00000275461 Macaca fascicularis ENSP00000275461 I 0.852
ENSP00000275461-D1 Bos grunniens ENSP00000275461-D1 I 0.852
ENSPANG00000010936 Papio anubis ENSPANG00000010936 I 0.852
FERD3L Procavia capensis ENSPCAG00000013680 I 0.852
ENSPFOG00000020055 Poecilia formosa ENSPFOG00000020055 I 0.864
ENSPPYG00000017753 Pongo abelii ENSPPYG00000017753 I 0.852
ENSPSIG00000000691 Pelodiscus sinensis ENSPSIG00000000691 I 0.852
FERD3L Pan troglodytes ENSPTRG00000018961 I 0.852
FERD3L Pteropus vampyrus ENSPVAG00000001711 I 0.852
Ferd3l Rattus norvegicus ENSRNOG00000011091 I 0.852
FERD3L Sus scrofa ENSSSCG00000015371 I 0.852
ENSSTOG00000025739 Ictidomys tridecemlineatus ENSSTOG00000025739 I 0.852
FERD3L Tupaia belangeri ENSTBEG00000003400 I 0.852
FERD3L Taeniopygia guttata ENSTGUG00000002644 I 0.852
FERD3L Takifugu rubripes ENSTRUG00000014737 I 0.914
ENSTSYG00000010121 Tarsius syrichta ENSTSYG00000010121 I 0.852
ENSXMAG00000020141 Xiphophorus maculatus ENSXMAG00000020141 I 0.864
Gfo_R002784 Geospiza fortis Gfo_R002784 I 0.852
LCUP001463 Lucilia cuprina LCUP001463 I 0.852
LLOJ008652 Lutzomyia longipalpis LLOJ008652 I 0.852
MDOA011992 Musca domestica MDOA011992 I 0.852
Myotis_brandtii_FERD3L_10031741 Myotis brandtii Myotis_brandtii_FERD3L_10031741 I 0.852
Ocbimv22002150m.g Octopus bimaculoides Ocbimv22002150m.g I 0.852
Ogr11551 Ophisaurus gracilis Ogr11551 I 0.852
PPAI004805 Phlebotomus papatasi PPAI004805 I 0.852
SMAR006706 Strigamia maritima SMAR006706 I 0.852
SMU15040320 Schmidtea mediterranea SMU15040320 I 0.864
ferd3l Xenopus tropicalis XB-GENE-983144 I 0.852
YQE_05939 Dendroctonus ponderosae YQE_05939 I 0.852