fgenesh2_kg.1__542__AT1G05805.1 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh2_kg.1__542__AT1G05805.1 T039112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.866 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__542__AT1G05805.1 bHLH 285 335

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ab00925 Panicum virgatum Pavir.Ab00925 N 0.000
Pavir.Ba03191 Panicum virgatum Pavir.Ba03191 N 0.000
Pavir.Da01665 Panicum virgatum Pavir.Da01665 N 0.000
Pavir.Ea01546 Panicum virgatum Pavir.Ea01546 N 0.000
Pavir.Ea01890 Panicum virgatum Pavir.Ea01890 N 0.000
Pavir.Eb02394 Panicum virgatum Pavir.Eb02394 N 0.000
Pavir.Ib01630 Panicum virgatum Pavir.Ib01630 N 0.000
Pavir.J05000 Panicum virgatum Pavir.J05000 N 0.000
Pavir.J30092 Panicum virgatum Pavir.J30092 N 0.000
Pavir.J35119 Panicum virgatum Pavir.J35119 N 0.000
Pavir.J35278 Panicum virgatum Pavir.J35278 N 0.000
Pavir.J35643 Panicum virgatum Pavir.J35643 N 0.000
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.000
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.000
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.000
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.000
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.000