CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0018s11800
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0018s11800
T043920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.914
0.979
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.914
0.938
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN
NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.885
0.646
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN
NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.872
0.646
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN
NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.872
0.646
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM
KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.872
0.646
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.872
0.646
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.872
0.646
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.872
0.646
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV
BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.858
0.667
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS
SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.845
0.646
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.845
0.646
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.845
0.667
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH
DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.845
0.667
PIF1
M09783_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.845
0.667
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0018s11800.1
bHLH
250
297
DPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
673 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_000030
Trichomonas vaginalis
TVAG_000030
N
0.000
TVAG_001330
Trichomonas vaginalis
TVAG_001330
N
0.000
TVAG_007040
Trichomonas vaginalis
TVAG_007040
N
0.000
TVAG_008440
Trichomonas vaginalis
TVAG_008440
N
0.000
TVAG_009880
Trichomonas vaginalis
TVAG_009880
N
0.000
TVAG_011920
Trichomonas vaginalis
TVAG_011920
N
0.000
TVAG_012150
Trichomonas vaginalis
TVAG_012150
N
0.000
TVAG_015720
Trichomonas vaginalis
TVAG_015720
N
0.000
TVAG_018850
Trichomonas vaginalis
TVAG_018850
N
0.000
TVAG_019920
Trichomonas vaginalis
TVAG_019920
N
0.000
TVAG_020730
Trichomonas vaginalis
TVAG_020730
N
0.000
TVAG_023760
Trichomonas vaginalis
TVAG_023760
N
0.000
TVAG_031600
Trichomonas vaginalis
TVAG_031600
N
0.000
TVAG_032030
Trichomonas vaginalis
TVAG_032030
N
0.000
TVAG_034280
Trichomonas vaginalis
TVAG_034280
N
0.000
TVAG_037740
Trichomonas vaginalis
TVAG_037740
N
0.000
TVAG_039390
Trichomonas vaginalis
TVAG_039390
N
0.000
TVAG_039550
Trichomonas vaginalis
TVAG_039550
N
0.000
TVAG_043230
Trichomonas vaginalis
TVAG_043230
N
0.000
TVAG_059800
Trichomonas vaginalis
TVAG_059800
N
0.000
TVAG_061750
Trichomonas vaginalis
TVAG_061750
N
0.000
TVAG_063960
Trichomonas vaginalis
TVAG_063960
N
0.000
TVAG_069660
Trichomonas vaginalis
TVAG_069660
N
0.000
TVAG_073020
Trichomonas vaginalis
TVAG_073020
N
0.000
TVAG_074110
Trichomonas vaginalis
TVAG_074110
N
0.000
TVAG_078240
Trichomonas vaginalis
TVAG_078240
N
0.000
TVAG_078430
Trichomonas vaginalis
TVAG_078430
N
0.000
TVAG_084650
Trichomonas vaginalis
TVAG_084650
N
0.000
TVAG_085930
Trichomonas vaginalis
TVAG_085930
N
0.000
TVAG_086370
Trichomonas vaginalis
TVAG_086370
N
0.000
TVAG_086900
Trichomonas vaginalis
TVAG_086900
N
0.000
TVAG_089480
Trichomonas vaginalis
TVAG_089480
N
0.000
TVAG_091390
Trichomonas vaginalis
TVAG_091390
N
0.000
TVAG_093130
Trichomonas vaginalis
TVAG_093130
N
0.000
TVAG_096910
Trichomonas vaginalis
TVAG_096910
N
0.000
TVAG_100210
Trichomonas vaginalis
TVAG_100210
N
0.000
TVAG_104600
Trichomonas vaginalis
TVAG_104600
N
0.000
TVAG_106270
Trichomonas vaginalis
TVAG_106270
N
0.000
TVAG_123760
Trichomonas vaginalis
TVAG_123760
N
0.000
TVAG_127100
Trichomonas vaginalis
TVAG_127100
N
0.000
TVAG_131670
Trichomonas vaginalis
TVAG_131670
N
0.000
TVAG_131940
Trichomonas vaginalis
TVAG_131940
N
0.000
TVAG_132110
Trichomonas vaginalis
TVAG_132110
N
0.000
TVAG_132840
Trichomonas vaginalis
TVAG_132840
N
0.000
TVAG_133550
Trichomonas vaginalis
TVAG_133550
N
0.000
TVAG_135590
Trichomonas vaginalis
TVAG_135590
N
0.000
TVAG_135820
Trichomonas vaginalis
TVAG_135820
N
0.000
TVAG_142090
Trichomonas vaginalis
TVAG_142090
N
0.000
TVAG_144220
Trichomonas vaginalis
TVAG_144220
N
0.000
TVAG_144940
Trichomonas vaginalis
TVAG_144940
N
0.000
TVAG_144990
Trichomonas vaginalis
TVAG_144990
N
0.000
TVAG_147450
Trichomonas vaginalis
TVAG_147450
N
0.000
TVAG_148150
Trichomonas vaginalis
TVAG_148150
N
0.000
TVAG_152980
Trichomonas vaginalis
TVAG_152980
N
0.000
TVAG_161880
Trichomonas vaginalis
TVAG_161880
N
0.000
TVAG_163090
Trichomonas vaginalis
TVAG_163090
N
0.000
TVAG_165780
Trichomonas vaginalis
TVAG_165780
N
0.000
TVAG_165880
Trichomonas vaginalis
TVAG_165880
N
0.000
TVAG_165930
Trichomonas vaginalis
TVAG_165930
N
0.000
TVAG_169420
Trichomonas vaginalis
TVAG_169420
N
0.000
TVAG_173550
Trichomonas vaginalis
TVAG_173550
N
0.000
TVAG_175140
Trichomonas vaginalis
TVAG_175140
N
0.000
TVAG_176820
Trichomonas vaginalis
TVAG_176820
N
0.000
TVAG_178970
Trichomonas vaginalis
TVAG_178970
N
0.000
TVAG_180740
Trichomonas vaginalis
TVAG_180740
N
0.000
TVAG_189330
Trichomonas vaginalis
TVAG_189330
N
0.000
TVAG_189910
Trichomonas vaginalis
TVAG_189910
N
0.000
TVAG_192190
Trichomonas vaginalis
TVAG_192190
N
0.000
TVAG_193830
Trichomonas vaginalis
TVAG_193830
N
0.000
TVAG_195150
Trichomonas vaginalis
TVAG_195150
N
0.000
TVAG_196040
Trichomonas vaginalis
TVAG_196040
N
0.000
TVAG_196090
Trichomonas vaginalis
TVAG_196090
N
0.000
TVAG_197560
Trichomonas vaginalis
TVAG_197560
N
0.000
TVAG_202380
Trichomonas vaginalis
TVAG_202380
N
0.000
TVAG_209740
Trichomonas vaginalis
TVAG_209740
N
0.000
TVAG_212170
Trichomonas vaginalis
TVAG_212170
N
0.000
TVAG_213940
Trichomonas vaginalis
TVAG_213940
N
0.000
TVAG_218340
Trichomonas vaginalis
TVAG_218340
N
0.000
TVAG_218910
Trichomonas vaginalis
TVAG_218910
N
0.000
TVAG_219060
Trichomonas vaginalis
TVAG_219060
N
0.000
TVAG_220700
Trichomonas vaginalis
TVAG_220700
N
0.000
TVAG_223910
Trichomonas vaginalis
TVAG_223910
N
0.000
TVAG_229000
Trichomonas vaginalis
TVAG_229000
N
0.000
TVAG_229790
Trichomonas vaginalis
TVAG_229790
N
0.000
TVAG_231510
Trichomonas vaginalis
TVAG_231510
N
0.000
TVAG_231960
Trichomonas vaginalis
TVAG_231960
N
0.000
TVAG_233540
Trichomonas vaginalis
TVAG_233540
N
0.000
TVAG_240890
Trichomonas vaginalis
TVAG_240890
N
0.000
TVAG_247790
Trichomonas vaginalis
TVAG_247790
N
0.000
TVAG_248770
Trichomonas vaginalis
TVAG_248770
N
0.000
TVAG_253450
Trichomonas vaginalis
TVAG_253450
N
0.000
TVAG_256950
Trichomonas vaginalis
TVAG_256950
N
0.000
TVAG_263380
Trichomonas vaginalis
TVAG_263380
N
0.000
TVAG_268540
Trichomonas vaginalis
TVAG_268540
N
0.000
TVAG_268940
Trichomonas vaginalis
TVAG_268940
N
0.000
TVAG_272290
Trichomonas vaginalis
TVAG_272290
N
0.000
TVAG_279630
Trichomonas vaginalis
TVAG_279630
N
0.000
TVAG_281270
Trichomonas vaginalis
TVAG_281270
N
0.000
TVAG_283440
Trichomonas vaginalis
TVAG_283440
N
0.000
TVAG_283940
Trichomonas vaginalis
TVAG_283940
N
0.000
TVAG_294600
Trichomonas vaginalis
TVAG_294600
N
0.000
TVAG_301510
Trichomonas vaginalis
TVAG_301510
N
0.000
TVAG_303220
Trichomonas vaginalis
TVAG_303220
N
0.000
TVAG_305200
Trichomonas vaginalis
TVAG_305200
N
0.000
TVAG_307610
Trichomonas vaginalis
TVAG_307610
N
0.000
TVAG_313480
Trichomonas vaginalis
TVAG_313480
N
0.000
TVAG_313570
Trichomonas vaginalis
TVAG_313570
N
0.000
TVAG_315480
Trichomonas vaginalis
TVAG_315480
N
0.000
TVAG_317430
Trichomonas vaginalis
TVAG_317430
N
0.000
TVAG_320380
Trichomonas vaginalis
TVAG_320380
N
0.000
TVAG_320500
Trichomonas vaginalis
TVAG_320500
N
0.000
TVAG_322370
Trichomonas vaginalis
TVAG_322370
N
0.000
TVAG_323080
Trichomonas vaginalis
TVAG_323080
N
0.000
TVAG_328710
Trichomonas vaginalis
TVAG_328710
N
0.000
TVAG_336190
Trichomonas vaginalis
TVAG_336190
N
0.000
TVAG_341450
Trichomonas vaginalis
TVAG_341450
N
0.000
TVAG_344590
Trichomonas vaginalis
TVAG_344590
N
0.000
TVAG_354160
Trichomonas vaginalis
TVAG_354160
N
0.000
TVAG_357730
Trichomonas vaginalis
TVAG_357730
N
0.000
TVAG_359600
Trichomonas vaginalis
TVAG_359600
N
0.000
TVAG_362140
Trichomonas vaginalis
TVAG_362140
N
0.000
TVAG_365310
Trichomonas vaginalis
TVAG_365310
N
0.000
TVAG_366540
Trichomonas vaginalis
TVAG_366540
N
0.000
TVAG_370110
Trichomonas vaginalis
TVAG_370110
N
0.000
TVAG_370740
Trichomonas vaginalis
TVAG_370740
N
0.000
TVAG_372400
Trichomonas vaginalis
TVAG_372400
N
0.000
TVAG_373520
Trichomonas vaginalis
TVAG_373520
N
0.000
TVAG_374610
Trichomonas vaginalis
TVAG_374610
N
0.000
TVAG_378230
Trichomonas vaginalis
TVAG_378230
N
0.000
TVAG_381540
Trichomonas vaginalis
TVAG_381540
N
0.000
TVAG_392870
Trichomonas vaginalis
TVAG_392870
N
0.000
TVAG_395590
Trichomonas vaginalis
TVAG_395590
N
0.000
TVAG_395910
Trichomonas vaginalis
TVAG_395910
N
0.000
TVAG_397540
Trichomonas vaginalis
TVAG_397540
N
0.000
TVAG_400670
Trichomonas vaginalis
TVAG_400670
N
0.000
TVAG_401500
Trichomonas vaginalis
TVAG_401500
N
0.000
TVAG_408590
Trichomonas vaginalis
TVAG_408590
N
0.000
TVAG_410580
Trichomonas vaginalis
TVAG_410580
N
0.000
TVAG_413540
Trichomonas vaginalis
TVAG_413540
N
0.000
TVAG_415170
Trichomonas vaginalis
TVAG_415170
N
0.000
TVAG_419070
Trichomonas vaginalis
TVAG_419070
N
0.000
TVAG_419450
Trichomonas vaginalis
TVAG_419450
N
0.000
TVAG_420550
Trichomonas vaginalis
TVAG_420550
N
0.000
TVAG_421910
Trichomonas vaginalis
TVAG_421910
N
0.000
TVAG_424900
Trichomonas vaginalis
TVAG_424900
N
0.000
TVAG_427750
Trichomonas vaginalis
TVAG_427750
N
0.000
TVAG_428470
Trichomonas vaginalis
TVAG_428470
N
0.000
TVAG_435140
Trichomonas vaginalis
TVAG_435140
N
0.000
TVAG_438640
Trichomonas vaginalis
TVAG_438640
N
0.000
TVAG_438980
Trichomonas vaginalis
TVAG_438980
N
0.000
TVAG_441020
Trichomonas vaginalis
TVAG_441020
N
0.000
TVAG_441880
Trichomonas vaginalis
TVAG_441880
N
0.000
TVAG_442440
Trichomonas vaginalis
TVAG_442440
N
0.000
TVAG_443820
Trichomonas vaginalis
TVAG_443820
N
0.000
TVAG_449990
Trichomonas vaginalis
TVAG_449990
N
0.000
TVAG_457960
Trichomonas vaginalis
TVAG_457960
N
0.000
TVAG_465690
Trichomonas vaginalis
TVAG_465690
N
0.000
TVAG_477840
Trichomonas vaginalis
TVAG_477840
N
0.000
TVAG_481800
Trichomonas vaginalis
TVAG_481800
N
0.000
TVAG_484870
Trichomonas vaginalis
TVAG_484870
N
0.000
TVAG_486490
Trichomonas vaginalis
TVAG_486490
N
0.000
TVAG_488260
Trichomonas vaginalis
TVAG_488260
N
0.000
TVAG_488720
Trichomonas vaginalis
TVAG_488720
N
0.000
TVAG_489030
Trichomonas vaginalis
TVAG_489030
N
0.000
TVAG_493340
Trichomonas vaginalis
TVAG_493340
N
0.000
TVAG_496890
Trichomonas vaginalis
TVAG_496890
N
0.000
TVAG_496900
Trichomonas vaginalis
TVAG_496900
N
0.000
TVAG_497700
Trichomonas vaginalis
TVAG_497700
N
0.000
TVAG_500580
Trichomonas vaginalis
TVAG_500580
N
0.000
TVAG_502960
Trichomonas vaginalis
TVAG_502960
N
0.000
TVAG_503090
Trichomonas vaginalis
TVAG_503090
N
0.000
TVAG_511510
Trichomonas vaginalis
TVAG_511510
N
0.000
TVAG_513290
Trichomonas vaginalis
TVAG_513290
N
0.000
TVAG_514890
Trichomonas vaginalis
TVAG_514890
N
0.000
TVAG_516680
Trichomonas vaginalis
TVAG_516680
N
0.000
TVAG_516790
Trichomonas vaginalis
TVAG_516790
N
0.000
TVAG_516860
Trichomonas vaginalis
TVAG_516860
N
0.000
TVAG_518840
Trichomonas vaginalis
TVAG_518840
N
0.000
TVAG_530100
Trichomonas vaginalis
TVAG_530100
N
0.000
TVAG_531720
Trichomonas vaginalis
TVAG_531720
N
0.000
TVAG_532480
Trichomonas vaginalis
TVAG_532480
N
0.000
TVAG_535670
Trichomonas vaginalis
TVAG_535670
N
0.000
TVAG_542020
Trichomonas vaginalis
TVAG_542020
N
0.000
TVAG_548520
Trichomonas vaginalis
TVAG_548520
N
0.000
TVAG_551460
Trichomonas vaginalis
TVAG_551460
N
0.000
TVAG_552010
Trichomonas vaginalis
TVAG_552010
N
0.000
TVAG_555360
Trichomonas vaginalis
TVAG_555360
N
0.000
TVAG_555720
Trichomonas vaginalis
TVAG_555720
N
0.000
TVAG_557630
Trichomonas vaginalis
TVAG_557630
N
0.000
TVAG_564540
Trichomonas vaginalis
TVAG_564540
N
0.000
TVAG_564720
Trichomonas vaginalis
TVAG_564720
N
0.000
TVAG_565070
Trichomonas vaginalis
TVAG_565070
N
0.000
TVAG_565180
Trichomonas vaginalis
TVAG_565180
N
0.000
TVAG_567350
Trichomonas vaginalis
TVAG_567350
N
0.000
TVAG_567610
Trichomonas vaginalis
TVAG_567610
N
0.000
TVAG_569770
Trichomonas vaginalis
TVAG_569770
N
0.000
TVAG_569930
Trichomonas vaginalis
TVAG_569930
N
0.000
TVAG_573210
Trichomonas vaginalis
TVAG_573210
N
0.000
TVAG_579330
Trichomonas vaginalis
TVAG_579330
N
0.000
TVAG_583180
Trichomonas vaginalis
TVAG_583180
N
0.000
TVAG_591060
Trichomonas vaginalis
TVAG_591060
N
0.000
TVAG_591850
Trichomonas vaginalis
TVAG_591850
N
0.000
TVAG_594390
Trichomonas vaginalis
TVAG_594390
N
0.000
TVAG_595810
Trichomonas vaginalis
TVAG_595810
N
0.000
TVAG_596090
Trichomonas vaginalis
TVAG_596090
N
0.000
TVAG_598650
Trichomonas vaginalis
TVAG_598650
N
0.000
TVAG_607240
Trichomonas vaginalis
TVAG_607240
N
0.000