VIT_00s0824g00020 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_00s0824g00020 T046138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.899 0.809
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.871 0.660
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.847 0.638
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.847 0.638
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.847 0.638
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.847 0.617
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.847 0.617
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_00s0824g00020.t01 bHLH 1 47

Links

Other bHLH family TFs
Other Vitis vinifera TFs

485 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29933.m001454 Ricinus communis 29933.m001454 N 0.000
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.000
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.000
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.000
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.000
MDP0000131822 Malus domestica MDP0000131822 I 0.000
MDP0000289283 Malus domestica MDP0000289283 I 0.000
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.000
PGSC0003DMG400008337 Solanum tuberosum PGSC0003DMG400008337 N 0.000
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.000
PGSC0003DMG400020012 Solanum tuberosum PGSC0003DMG400020012 N 0.000
PGSC0003DMG400020013 Solanum tuberosum PGSC0003DMG400020013 N 0.000
PGSC0003DMG400027575 Solanum tuberosum PGSC0003DMG400027575 N 0.000
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.000
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.000
Pm009880 Prunus mume Pm009880 N 0.000
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.000
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.000
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.000
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.000
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.000
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N 0.000
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.000
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N 0.000
Solyc06g033870.1 Solanum lycopersicum Solyc06g033870.1 N 0.000
Solyc06g034000.1 Solanum lycopersicum Solyc06g034000.1 N 0.000
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.000
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.000
TCM_030020 Theobroma cacao TCM_030020 I 0.000
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.000