Afo_R013292 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R013292 T046602_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.894 0.942
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.894 0.942
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.894 0.942
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.894 0.942
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.894 0.942
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.894 0.923
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.879 0.865
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.879 0.865
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.879 0.865
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.879 0.865
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.879 0.865
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.879 0.865
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.879 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R013292 bHLH 68 119

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00594 Capronia coronata A1O1_00594 I
A1O5_08185 Cladophialophora psammophila A1O5_08185 N
BBA_01514 Beauveria bassiana BBA_01514 I
BDDG_05568 Blastomyces dermatitidis BDDG_05568 N
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I
ATEG_08244 Aspergillus terreus CADATEAG00003887 N
NFIA_040650 Neosartorya fischeri CADNFIAG00003354 I
CCM_04341 Cordyceps militaris CCM_04341 I
CLUG_01645 Clavispora lusitaniae CLUG_01645 N
CLUG_01645 Candida lusitaniae CLUG_01645 N
COCMIDRAFT_107123 Bipolaris oryzae COCMIDRAFT_107123 I
fgenesh1_pg.C_chr_6.1000096 Pichia stipitis fgenesh1_pg.C_chr_6.1000096 I
fgenesh1_pm.00168_#_452 Aspergillus carbonarius fgenesh1_pm.00168_#_452 I
FVEG_08195 Fusarium verticillioides FVEG_08195 N
GMDG_04293 Pseudogymnoascus destructans GMDG_04293 I
HCBG_03369 Histoplasma capsulatum HCBG_03369 N
HPODL_04541 Ogataea parapolymorpha HPODL_04541 N
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I
Kwal_6732 Kluyveromyces waltii Kwal_6732 I
LELG_02863 Lodderomyces elongisporus LELG_02863 N
M438DRAFT_64434 Aureobasidium pullulans M438DRAFT_64434 I
MPH_01921 Macrophomina phaseolina MPH_01921 I
OIDMADRAFT_160412 Oidiodendron maius OIDMADRAFT_160412 N
PAAG_02753 Paracoccidioides sp lutzii PAAG_02753 N
PABG_03226 Paracoccidioides brasiliensis PABG_03226 N
Pc12g02800 Penicillium chrysogenum Pc12g02800 N
PDE_06431 Penicillium oxalicum PDE_06431 N
PEX1_064660 Penicillium expansum PEX1_064660 N
PFICI_05184 Pestalotiopsis fici PFICI_05184 I
PICST_32615 Scheffersomyces stipitis PICST_32615 I
PV04_10066 Capronia semiimmersa PV04_10066 I
PV05_03077 Exophiala xenobiotica PV05_03077 I
PV06_08173 Exophiala oligosperma PV06_08173 N
PV07_01234 Cladophialophora immunda PV07_01234 I
PV07_04955 Cladophialophora immunda PV07_04955 N
PV08_05182 Exophiala spinifera PV08_05182 N
PV11_05379 Exophiala sideris PV11_05379 N
SNOG_09854 Stagonospora nodorum SNOG_09854 I
SNOG_09854 Phaeosphaeria nodorum SNOG_09854 I
SPAPADRAFT_61965 Spathaspora passalidarum SPAPADRAFT_61965 N
SPOG_02829 Schizosaccharomyces cryophilus SPOG_02829 I
TRIATDRAFT_13008 Trichoderma atroviride TRIATDRAFT_13008 I
V499_04479 Pseudogymnoascus pannorum V499_04479 N
VHEMI02369 Torrubiella hemipterigena VHEMI02369 N
Z519_01437 Cladophialophora bantiana Z519_01437 I
Z519_09408 Cladophialophora bantiana Z519_09408 N