Alligator_sinensis_CCG018566.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG018566.1 T046677_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcfl5
M01744_2.00 		Mus musculus
NBCDCGHGVN
NBCDCGHGVN		 PBM
Weirauch et al.(2014)
pTH4576 		0.902 0.941
TCFL5
M04074_2.00 		Homo sapiens
KCRCGCGCHC
GDGCGCGYGM		 SELEX
Yin et al.(2017)
TCFL5_eDBD_HT-SELEX 		0.902 0.941
TCFL5
M04075_2.00 		Homo sapiens
BCRCGCGCMC
GKGCGCGYGV		 SELEX
Yin et al.(2017)
TCFL5_eDBD_Methyl-HT-SELEX 		0.902 0.941
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018566.1 bHLH 438 488

Links

Other bHLH family TFs
Other Alligator sinensis TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF48 Bos taurus ENSBTAG00000031806 N
ENSBTAP00000028273-D1 Bos grunniens ENSBTAP00000028273-D1 N
ZNF48 Canis familiaris ENSCAFG00000029852 N
ZNF48 Callithrix jacchus ENSCJAG00000002611 I
ZNF48 Cavia porcellus ENSCPOG00000001104 N
ENSCSAG00000006039 Chlorocebus sabaeus ENSCSAG00000006039 N
Zfp553 Dipodomys ordii ENSDORG00000013148 N
ZNF48 Felis catus ENSFCAG00000028864 N
ZNF48 Homo sapiens ENSG00000180035 N
ZNF48 Loxodonta africana ENSLAFG00000008821 N
ZNF48 Macaca mulatta ENSMMUG00000029159 N
ENSMPUG00000012333 Mustela putorius furo ENSMPUG00000012333 N
Zfp553 Mus musculus ENSMUSG00000045598 N
ZNF48 Oryctolagus cuniculus ENSOCUG00000013651 N
ENSP00000417204 Macaca fascicularis ENSP00000417204 N
ENSPANG00000016527 Papio anubis ENSPANG00000016527 N
ZNF48 Procavia capensis ENSPCAG00000009103 N
ENSPPYG00000007271 Pongo abelii ENSPPYG00000007271 N
ZNF48 Pan troglodytes ENSPTRG00000007999 N
Znf48 Rattus norvegicus ENSRNOG00000017837 N
ZNF48 Sus scrofa ENSSSCG00000007801 N
ENSSTOG00000021915 Ictidomys tridecemlineatus ENSSTOG00000021915 N
ZNF48 Tursiops truncatus ENSTTRG00000017273 N
Myotis_brandtii_ZNF48_10014474 Myotis brandtii Myotis_brandtii_ZNF48_10014474 N