CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Brh_R011663
(
Buceros rhinoceros
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Brh_R011663
T046733_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes5
M01747_2.00
Mus musculus
NVCRCGYGBN
NVCRCGYGBN
PBM
Weirauch et al.(2014)
pTH5450
0.860
0.891
HES5
M02809_2.00
Homo sapiens
YGRCACGTGCCD
HGGCACGTGYCR
SELEX
Jolma et al.(2013)
HES5_1
0.860
0.891
HES5
M02810_2.00
Homo sapiens
YGGCACGTGCCR
YGGCACGTGCCR
SELEX
Jolma et al.(2013)
HES5_2
0.860
0.891
HES5
M04216_2.00
Homo sapiens
VRCACGTGCC
GGCACGTGYB
SELEX
Yin et al.(2017)
HES5_eDBD_HT-SELEX
0.860
0.891
HES5
M04217_2.00
Homo sapiens
VRCACGTGCC
GGCACGTGYB
SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_1
0.860
0.891
HES5
M04218_2.00
Homo sapiens
VSACRCKY
RMGYGTSB
SELEX
Yin et al.(2017)
HES5_eDBD_Methyl-HT-SELEX_2
0.860
0.891
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R011663
bHLH
17
73
NRLRKPIVEKLRRDRINSSIEQLKLLLEKEFQRHQPNSKLEKADILEMTVSYLKYSR
Links
Other
bHLH
family TFs
Other
Buceros rhinoceros
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_04559
Cladophialophora psammophila
A1O5_04559
N
A1O7_03173
Cladophialophora yegresii
A1O7_03173
N
BAUCODRAFT_33056
Baudoinia compniacensis
BAUCODRAFT_33056
N
DOTSEDRAFT_72349
Dothistroma septosporum
DOTSEDRAFT_72349
N
G647_05219
Cladophialophora carrionii
G647_05219
N
HMPREF1120_05457
Exophiala dermatitidis
HMPREF1120_05457
N
MYCFIDRAFT_138994
Pseudocercospora fijiensis
MYCFIDRAFT_138994
N
PV04_03353
Capronia semiimmersa
PV04_03353
N
PV05_06062
Exophiala xenobiotica
PV05_06062
N
PV06_02667
Exophiala oligosperma
PV06_02667
N
PV07_06832
Cladophialophora immunda
PV07_06832
N
PV08_11270
Exophiala spinifera
PV08_11270
N
PV10_05668
Exophiala mesophila
PV10_05668
N
SEPMUDRAFT_66997
Sphaerulina musiva
SEPMUDRAFT_66997
N
Z517_10512
Fonsecaea pedrosoi
Z517_10512
N
Z518_01535
Rhinocladiella mackenziei
Z518_01535
N