cassava45968.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava45968.m1 T048101_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.860 0.615
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45968.m1 bHLH 64 116

Links

Other bHLH family TFs
Other Manihot esculenta TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014147 Ricinus communis 30147.m014147 N 0.866
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.860
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.881
Bo2g048240 Brassica oleracea Bo2g048240 I 0.846
Bo7g110280 Brassica oleracea Bo7g110280 I 0.881
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.838
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.902
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.860
Bra019167 Brassica rapa Bra019167 I 0.869
Bra022562 Brassica rapa Bra022562 I 0.857
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.902
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.859
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.859
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.902
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.878
cassava21380.m1 Manihot esculenta cassava21380.m1 N 0.846
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.902
Ca_22233 Cicer arietinum Ca_22233 I 0.879
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.878
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.846
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.858
evm.TU.supercontig_4.179 Carica papaya evm.TU.supercontig_4.179 N 0.867
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.856
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.881
gene13365-v1.0-hybrid Fragaria vesca gene13365-v1.0-hybrid N 0.839
gene32346-v1.0-hybrid Fragaria vesca gene32346-v1.0-hybrid N 0.841
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.858
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.867
GLYMA10G38630 Glycine max GLYMA10G38630 N 0.842
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.858
GLYMA16G32620 Glycine max GLYMA16G32620 N 0.855
GLYMA20G29120 Glycine max GLYMA20G29120 N 0.842
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.893
Gorai.008G282300 Gossypium raimondii Gorai.008G282300 I 0.865
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.890
MDP0000246258 Malus domestica MDP0000246258 I 0.870
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.867
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.866
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.878
PK11667.1 Cannabis sativa PK11667.1 I 0.858
PK15358.1 Cannabis sativa PK15358.1 I 0.879
Pm019419 Prunus mume Pm019419 I 0.890
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.902
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.890
TCM_016133 Theobroma cacao TCM_016133 I 0.874
TCM_016134 Theobroma cacao TCM_016134 I 0.874
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.869
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.881