estExt_fgenesh2_kg.C_7600001 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_kg.C_7600001 T048371_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROG2
M02799_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
NEUROG2_1 		0.842 0.865
NEUROG2
M02800_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
NEUROG2_2 		0.842 0.865
NEUROG2
M04179_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX 		0.842 0.865
NEUROG2
M04181_2.00 		Homo sapiens
RVCATRTGBY
RVCAYATGBY		 SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX 		0.842 0.865
Neurog2
M08758_2.00 		Mus musculus
VBRRCAGATGGB
VCCATCTGYYVB		 Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C 		0.842 0.865
NEUROG2
M09879_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NGN2_Q3 		0.842 0.865
NEUROG2
M04180_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX 		0.842 0.865
NEUROG2
M04182_2.00 		Homo sapiens
RMCRTRTGYY
RRCAYAYGKY		 SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX 		0.842 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_7600001 bHLH 124 176

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002402 Calypte anna Aan_R002402 I
Alligator_sinensis_CCG014457.1 Alligator sinensis Alligator_sinensis_CCG014457.1 I
SP2 Anolis carolinensis ENSACAG00000006793 I
ENSAMEG00000004772 Ailuropoda melanoleuca ENSAMEG00000004772 I
ENSAMXG00000018374 Astyanax mexicanus ENSAMXG00000018374 I
SP2 Bos taurus ENSBTAG00000013740 I
SP2 Canis familiaris ENSCAFG00000016812 I
ENSCHOG00000008313 Choloepus hoffmanni ENSCHOG00000008313 I
SP2 Callithrix jacchus ENSCJAG00000007713 I
SP2 Cavia porcellus ENSCPOG00000014943 I
ENSCSAG00000002567 Chlorocebus sabaeus ENSCSAG00000002567 I
sp2 Danio rerio ENSDARG00000076763 I
SP2 Equus caballus ENSECAG00000012859 I
SP2 Erinaceus europaeus ENSEEUG00000014248 I
SP2 Echinops telfairi ENSETEG00000009168 I
SP2 Felis catus ENSFCAG00000009365 I
SP2 Homo sapiens ENSG00000167182 D
sp2 Gasterosteus aculeatus ENSGACG00000019811 I
SP2 Gallus gallus ENSGALG00000000233 I
SP2 Gorilla gorilla ENSGGOG00000005330 I
ENSGMOG00000007030 Gadus morhua ENSGMOG00000007030 I
ENSLACG00000006434 Latimeria chalumnae ENSLACG00000006434 I
SP2 Loxodonta africana ENSLAFG00000021817 I
ENSLOCG00000013729 Lepisosteus oculatus ENSLOCG00000013729 I
ENSMICG00000014053 Microcebus murinus ENSMICG00000014053 I
SP2 Myotis lucifugus ENSMLUG00000005000 I
SP2 Macaca mulatta ENSMMUG00000004765 I
SP2 Monodelphis domestica ENSMODG00000012452 I
ENSMPUG00000015289 Mustela putorius furo ENSMPUG00000015289 I
Sp2 Mus musculus ENSMUSG00000018678 D
ENSNLEG00000002058 Nomascus leucogenys ENSNLEG00000002058 I
ENSOARG00000007752 Ovis aries ENSOARG00000007752 I
SP2 Oryctolagus cuniculus ENSOCUG00000027415 I
SP2 Otolemur garnettii ENSOGAG00000030380 I
ENSONIG00000000117 Oreochromis niloticus ENSONIG00000000117 I
sp2 Oryzias latipes ENSORLG00000000102 I
ENSP00000365931 Macaca fascicularis ENSP00000365931 I
ENSPANG00000022922 Papio anubis ENSPANG00000022922 I
ENSPFOG00000013068 Poecilia formosa ENSPFOG00000013068 I
ENSPPYG00000008885 Pongo abelii ENSPPYG00000008885 I
SP2 Pan troglodytes ENSPTRG00000009342 I
SP2 Pteropus vampyrus ENSPVAG00000004255 I
Sp2 Rattus norvegicus ENSRNOG00000010492 I
SP2 Sorex araneus ENSSARG00000003559 I
ENSSHAG00000005633 Sarcophilus harrisii ENSSHAG00000005633 I
ENSSTOG00000015926 Ictidomys tridecemlineatus ENSSTOG00000015926 I
sp2 Tetraodon nigroviridis ENSTNIG00000006290 I
sp2 Takifugu rubripes ENSTRUG00000007642 I
SP2 Tursiops truncatus ENSTTRG00000012483 I
ENSXMAG00000014321 Xiphophorus maculatus ENSXMAG00000014321 I
Myotis_brandtii_SP2_10030436 Myotis brandtii Myotis_brandtii_SP2_10030436 I
Ogr12593 Ophisaurus gracilis Ogr12593 I
Pvit_13958 Pogona vitticeps Pvit_13958 I
sp2 Xenopus tropicalis XB-GENE-968274 I
sp2.S Xenopus laevis XB-GENE-968279 I