CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016092m
(
Mimulus guttatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
mgf016092m
T048771_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.879
0.959
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.856
0.898
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.856
0.898
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016092m
bHLH
318
366
HPRSIAERVRRTKISERMRKLQELVPNMEKQTNTSDMLDLAVDYIKDLQ
Links
Other
bHLH
family TFs
Other
Mimulus guttatus
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006403
Ricinus communis
30169.m006403
I
0.879
BHLH122
Arabidopsis thaliana
AT1G51140
D
0.856
AT2G42280
Arabidopsis thaliana
AT2G42280
D
0.879
BGIOSGA016651
Oryza indica
BGIOSGA016651
I
0.851
Bo4g015860
Brassica oleracea
Bo4g015860
I
0.914
Bo4g191390
Brassica oleracea
Bo4g191390
I
0.856
Bo6g024810
Brassica oleracea
Bo6g024810
I
0.856
Bostr.25993s0551
Boechera stricta
Bostr.25993s0551
I
0.858
Bostr.26675s0074
Boechera stricta
Bostr.26675s0074
I
0.856
Bra004678
Brassica rapa
Bra004678
I
0.914
Bra016886
Brassica rapa
Bra016886
I
0.856
Bra018896
Brassica rapa
Bra018896
I
0.856
BRADI3G48070
Brachypodium distachyon
BRADI3G48070
I
0.851
BRADI4G33670
Brachypodium distachyon
BRADI4G33670
I
0.902
Cagra.2093s0006
Capsella grandiflora
Cagra.2093s0006
I
0.856
Cagra.2636s0012
Capsella grandiflora
Cagra.2636s0012
I
0.879
Carubv10009458m.g
Capsella rubella
Carubv10009458m.g
I
0.856
Carubv10023498m.g
Capsella rubella
Carubv10023498m.g
I
0.879
Ca_02662
Cicer arietinum
Ca_02662
I
0.856
Ca_07284
Cicer arietinum
Ca_07284
I
0.846
Ca_14223
Cicer arietinum
Ca_14223
I
0.856
Ca_18899
Cicer arietinum
Ca_18899
I
0.914
Ciclev10015437m.g
Citrus clementina
Ciclev10015437m.g
I
0.856
Cla006394
Citrullus lanatus
Cla006394
I
0.914
Cucsa.143260
Cucumis sativus
Cucsa.143260
I
0.914
estExt_fgenesh1_pg.C_2130035
Physcomitrella patens
estExt_fgenesh1_pg.C_2130035
N
0.863
Eucgr.B03669
Eucalyptus grandis
Eucgr.B03669
I
0.856
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
0.844
e_gw1.272.41.1
Physcomitrella patens
e_gw1.272.41.1
I
0.845
e_gw1.83.237.1
Physcomitrella patens
e_gw1.83.237.1
I
0.893
fgenesh2_kg.1__4183__AT1G51140.1
Arabidopsis lyrata
fgenesh2_kg.1__4183__AT1G51140.1
I
0.856
GLYMA11G13960
Glycine max
GLYMA11G13960
I
0.856
GLYMA12G05930
Glycine max
GLYMA12G05930
I
0.856
GLYMA13G41670
Glycine max
GLYMA13G41670
I
0.856
GLYMA15G03740
Glycine max
GLYMA15G03740
I
0.856
Gorai.009G071900
Gossypium raimondii
Gorai.009G071900
I
0.856
GRMZM2G085467
Zea mays
GRMZM2G085467
I
0.844
GRMZM2G142932
Zea mays
GRMZM2G142932
I
0.902
GRMZM2G153454
Zea mays
GRMZM2G153454
I
0.902
GRMZM2G417597
Zea mays
GRMZM2G417597
I
0.844
GRMZM5G879527
Zea mays
GRMZM5G879527
N
0.872
GSMUA_Achr3G11110_001
Musa acuminata
GSMUA_Achr3G11110_001
I
0.844
GSMUA_Achr9G27780_001
Musa acuminata
GSMUA_Achr9G27780_001
I
0.856
LPERR04G13560
Leersia perrieri
LPERR04G13560
I
0.851
LPERR08G16800
Leersia perrieri
LPERR08G16800
I
0.867
LPERR09G10800
Leersia perrieri
LPERR09G10800
I
0.867
MDP0000307685
Malus domestica
MDP0000307685
I
0.879
MLOC_12058
Hordeum vulgare
MLOC_12058
I
0.851
MLOC_30102
Hordeum vulgare
MLOC_30102
I
0.902
MTR_1g052470
Medicago truncatula
MTR_1g052470
I
0.914
MTR_2g098310
Medicago truncatula
MTR_2g098310
I
0.856
MTR_4g065870
Medicago truncatula
MTR_4g065870
I
0.914
MTR_7g092540
Medicago truncatula
MTR_7g092540
I
0.840
OB04G24170
Oryza brachyantha
OB04G24170
I
0.851
OBART04G16900
Oryza barthii
OBART04G16900
I
0.851
OGLUM04G16920
Oryza glumaepatula
OGLUM04G16920
I
0.851
OMERI04G14260
Oryza meridionalis
OMERI04G14260
I
0.851
ONIVA04G15000
Oryza nivara
ONIVA04G15000
I
0.851
OPUNC04G14700
Oryza punctata
OPUNC04G14700
I
0.851
orange1.1g015337m.g
Citrus sinensis
orange1.1g015337m.g
I
0.856
ORGLA04G0140000
Oryza glaberrima
ORGLA04G0140000
I
0.851
ORUFI04G18350
Oryza rufipogon
ORUFI04G18350
I
0.851
OS04G0489600
Oryza sativa
OS04G0489600
I
0.851
Pavir.Ba00676
Panicum virgatum
Pavir.Ba00676
I
0.902
Pavir.Ba01718
Panicum virgatum
Pavir.Ba01718
I
0.844
Pavir.Bb03157
Panicum virgatum
Pavir.Bb03157
I
0.902
Pavir.Fa00493
Panicum virgatum
Pavir.Fa00493
I
0.902
Pavir.J00377
Panicum virgatum
Pavir.J00377
I
0.844
Pavir.J14004
Panicum virgatum
Pavir.J14004
I
0.844
Pavir.J25484
Panicum virgatum
Pavir.J25484
I
0.902
PK20089.1
Cannabis sativa
PK20089.1
I
0.856
POPTR_0003s22290
Populus trichocarpa
POPTR_0003s22290
I
0.879
SapurV1A.0009s0400
Salix purpurea
SapurV1A.0009s0400
I
0.879
Sb02g028300
Sorghum bicolor
Sb02g028300
I
0.844
Sb07g027810
Sorghum bicolor
Sb07g027810
I
0.902
scaffold_403077.1
Arabidopsis lyrata
scaffold_403077.1
I
0.879
Si013950m.g
Setaria italica
Si013950m.g
I
0.902
Si029614m.g
Setaria italica
Si029614m.g
I
0.844
Si030166m.g
Setaria italica
Si030166m.g
I
0.902
TCM_040564
Theobroma cacao
TCM_040564
I
0.856
Thhalv10011463m.g
Eutrema salsugineum
Thhalv10011463m.g
I
0.856
Traes_5BL_4317E525B
Triticum aestivum
Traes_5BL_4317E525B
I
0.902
VIT_06s0004g01740
Vitis vinifera
VIT_06s0004g01740
I
0.879