Carubv10006264m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10006264m.g T049348_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.866 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006264m bHLH 2 54

Links

Other bHLH family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.866
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.845
Bo2g048240 Brassica oleracea Bo2g048240 I 0.857
Bo7g110280 Brassica oleracea Bo7g110280 I 0.845
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.866
Bra022562 Brassica rapa Bra022562 I 0.869
Cagra.2248s0016 Capsella grandiflora Cagra.2248s0016 I 0.914
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.848
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.846
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.845
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.848
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.845