Pavir.Bb03409 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Bb03409 T050704_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03409.1.p bHLH 47 97
Pavir.Bb03409.2.p bHLH 34 84
Pavir.Bb03409.3.p bHLH 34 84
Pavir.Bb03409.4.p bHLH 34 84
Pavir.Bb03409.5.p bHLH 34 84
Pavir.Bb03409.7.p bHLH 47 97
Pavir.Bb03409.9.p bHLH 47 97

Links

Other bHLH family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1A Oryza indica BGIOSGA029415 I
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I
F775_27111 Aegilops tauschii F775_27111 I
GRMZM2G069082 Zea mays GRMZM2G069082 I
GRMZM2G069126 Zea mays GRMZM2G069126 I
GRMZM2G069146 Zea mays GRMZM2G069146 I
GRMZM2G124011 Zea mays GRMZM2G124011 I
GRMZM2G124037 Zea mays GRMZM2G124037 I
LPERR09G12950 Leersia perrieri LPERR09G12950 I
OBART09G16810 Oryza barthii OBART09G16810 I
OBART09G16830 Oryza barthii OBART09G16830 I
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I
OMERI09G12490 Oryza meridionalis OMERI09G12490 I
ONIVA09G17900 Oryza nivara ONIVA09G17900 I
OPUNC09G15260 Oryza punctata OPUNC09G15260 I
OPUNC09G15290 Oryza punctata OPUNC09G15290 I
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I
DREB1A Oryza sativa OS09G0522200 D
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I
Pavir.J03892 Panicum virgatum Pavir.J03892 I
Pavir.J03893 Panicum virgatum Pavir.J03893 I
Pavir.J27101 Panicum virgatum Pavir.J27101 I
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D
Sb02g030320 Sorghum bicolor Sb02g030320 I
Sb02g030330 Sorghum bicolor Sb02g030330 I
Sb02g030340 Sorghum bicolor Sb02g030340 I
Sb05g006275 Sorghum bicolor Sb05g006275 I
Si030998m.g Setaria italica Si030998m.g I
Si031001m.g Setaria italica Si031001m.g I
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I