CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ca01783
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Ca01783
T050711_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ca01783.1.p
bHLH
132
181
SQSAQSAAARQRRKRISEKTAELSRLIPGGRKMNTAEMLEEAARHVKLLQ
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000717601
Angiostrongylus cantonensis
ACAC_0000717601
I
ACOC_0000940401
Angiostrongylus costaricensis
ACOC_0000940401
I
ANCCAN_05054
Ancylostoma caninum
ANCCAN_05054
I
CBG20744
Caenorhabditis briggsae
CBG20744
I
CBN20549
Caenorhabditis brenneri
CBN20549
I
HPBE_0002023301
Heligmosomoides bakeri
HPBE_0002023301
I
NECAME_17035
Necator americanus
NECAME_17035
I
OESDEN_07424
Oesophagostomum dentatum
OESDEN_07424
I
zip-3
Caenorhabditis elegans
WBGene00012330
D