Thhalv10004031m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10004031m.g T051183_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.914 1.000
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.901 0.882
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.901 0.882
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.888 0.922
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.888 0.922
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.875 0.902
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.875 0.882
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.875 0.882
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.875 0.882
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.804
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.864 0.824
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.864 0.804
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.864 0.804
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004031m bHLH 323 373

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

884 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3770_YDR096W Saccharomyces mikatae 3770_YDR096W I
4088_Multiple Saccharomyces paradoxus 4088_Multiple I
4347_Multiple Saccharomyces bayanus 4347_Multiple I
6173_YER169W Saccharomyces mikatae 6173_YER169W I
6757_YER169W Saccharomyces paradoxus 6757_YER169W I
7085_YER169W Saccharomyces bayanus 7085_YER169W I
AACERI_AaceriAGR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR117C I
AGOS_AGR117C Ashbya gossypii AGOS_AGR117C I
CAGL0L11880g Candida glabrata CAGL0L11880g I
Ecym_3520 Eremothecium cymbalariae Ecym_3520 I
KAFR_0A02380 Kazachstania africana KAFR_0A02380 I
KAFR_0B02550 Kazachstania africana KAFR_0B02550 I
KLLA0_C17710g Kluyveromyces lactis KLLA0_C17710g I
KLTH0G14454g Lachancea thermotolerans KLTH0G14454g I
KLTH0G14454g Kluyveromyces thermotolerans KLTH0G14454g I
KNAG_0G01870 Kazachstania naganishii KNAG_0G01870 I
KNAG_0H03010 Kazachstania naganishii KNAG_0H03010 I
Kpol_1032p52 Vanderwaltozyma polyspora Kpol_1032p52 I
LALA0_S07e07030g Lachancea lanzarotensis LALA0_S07e07030g I
NCAS_0B04840 Naumovozyma castellii NCAS_0B04840 I
NDAI_0B02250 Naumovozyma dairenensis NDAI_0B02250 I
SAKL0H17842g Lachancea kluyveri SAKL0H17842g I
Scas_Contig681.19 Saccharomyces castellii Scas_Contig681.19 I
SKUD_141701 Saccharomyces kudriavzevii SKUD_141701 I
SU7_0636 Saccharomyces arboricola SU7_0636 I
SU7_0955 Saccharomyces arboricola SU7_0955 I
TBLA_0E04220 Tetrapisispora blattae TBLA_0E04220 I
TBLA_0F03830 Tetrapisispora blattae TBLA_0F03830 I
TDEL_0A01300 Torulaspora delbrueckii TDEL_0A01300 I
TPHA_0A01940 Tetrapisispora phaffii TPHA_0A01940 I
GIS1 Saccharomyces cerevisiae YDR096W D
RPH1 Saccharomyces cerevisiae YER169W D
ZBAI_04846 Zygosaccharomyces bailii ZBAI_04846 I
ZBAI_06407 Zygosaccharomyces bailii ZBAI_06407 I
ZYRO0B11770g Zygosaccharomyces rouxii ZYRO0B11770g I