Thhalv10014242m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10014242m.g T051232_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.914 0.922
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.901 0.863
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.901 0.863
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.888 0.902
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.888 0.902
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.875 0.882
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.875 0.863
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.875 0.863
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.875 0.843
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868 0.765
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864 0.804
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864 0.784
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10014239m bHLH 153 203
Thhalv10014242m bHLH 153 203

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

885 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG003455.1 Alligator sinensis Alligator_sinensis_CCG003455.1 I
Cmyd_10007335 Chelonia mydas Cmyd_10007335 I
ENSAMEG00000006419 Ailuropoda melanoleuca ENSAMEG00000006419 I
ENSAMXG00000001207 Astyanax mexicanus ENSAMXG00000001207 I
ZBTB3 Bos taurus ENSBTAG00000021329 I
ENSBTAP00000051139-D1 Bos grunniens ENSBTAP00000051139-D1 I
ZBTB3 Canis familiaris ENSCAFG00000015650 I
ZBTB3 Choloepus hoffmanni ENSCHOG00000012845 I
ZBTB3 Callithrix jacchus ENSCJAG00000018693 I
ZBTB3 Cavia porcellus ENSCPOG00000011665 I
ENSCSAG00000006712 Chlorocebus sabaeus ENSCSAG00000006712 I
zbtb3 Danio rerio ENSDARG00000036235 I
ENSDNOG00000006546 Dasypus novemcinctus ENSDNOG00000006546 I
ZBTB3 Dasypus novemcinctus ENSDNOG00000043011 I
Zbtb3 Dipodomys ordii ENSDORG00000015697 I
ZBTB3 Felis catus ENSFCAG00000027690 I
ZBTB3 Homo sapiens ENSG00000185670 I
zbtb3 Gasterosteus aculeatus ENSGACG00000016930 I
ZBTB3 Gorilla gorilla ENSGGOG00000011735 I
ENSLACG00000006879 Latimeria chalumnae ENSLACG00000006879 I
ENSLOCG00000001327 Lepisosteus oculatus ENSLOCG00000001327 I
ENSMEUG00000015659 Macropus eugenii ENSMEUG00000015659 I
ZBTB3 Microcebus murinus ENSMICG00000009961 I
ZBTB3 Myotis lucifugus ENSMLUG00000011020 I
ENSMMUG00000014369 Macaca mulatta ENSMMUG00000014369 I
ENSMODG00000007952 Monodelphis domestica ENSMODG00000007952 I
ENSMPUG00000013694 Mustela putorius furo ENSMPUG00000013694 I
Zbtb3 Mus musculus ENSMUSG00000071661 D
ENSNLEG00000004096 Nomascus leucogenys ENSNLEG00000004096 I
ENSOANG00000001309 Ornithorhynchus anatinus ENSOANG00000001309 I
ENSOARG00000016929 Ovis aries ENSOARG00000016929 I
ZBTB3 Oryctolagus cuniculus ENSOCUG00000008921 I
ZBTB3 Otolemur garnettii ENSOGAG00000011414 I
ENSONIG00000005336 Oreochromis niloticus ENSONIG00000005336 I
zbtb3 Oryzias latipes ENSORLG00000002503 N
ENSP00000378286 Macaca fascicularis ENSP00000378286 I
ENSPANG00000008469 Papio anubis ENSPANG00000008469 I
ENSPPYG00000003148 Pongo abelii ENSPPYG00000003148 I
ENSPSIG00000001786 Pelodiscus sinensis ENSPSIG00000001786 I
ZBTB3 Pan troglodytes ENSPTRG00000003785 I
ZBTB3 Pteropus vampyrus ENSPVAG00000003477 I
Zbtb3 Rattus norvegicus ENSRNOG00000019461 I
ENSSSCG00000025351 Sus scrofa ENSSSCG00000025351 I
ENSSTOG00000027839 Ictidomys tridecemlineatus ENSSTOG00000027839 I
zbtb3 Tetraodon nigroviridis ENSTNIG00000003382 I
zbtb3 Takifugu rubripes ENSTRUG00000013773 I
ZBTB3 Tursiops truncatus ENSTTRG00000002477 I
ENSXMAG00000003145 Xiphophorus maculatus ENSXMAG00000003145 I
Ogr03307 Ophisaurus gracilis Ogr03307 I
Pvit_09391 Pogona vitticeps Pvit_09391 I
zbtb3 Xenopus tropicalis XB-GENE-991962 I