SMU15028020 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15028020 T051703_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.890 0.885
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.890 0.885
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.890 0.885
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.870 0.865
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.870 0.865
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.870 0.865
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.870 0.865
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.870 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15028020 bHLH 129 181

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008660 Aedes aegypti AAEL008660 I 0.890
AALB002674 Anopheles albimanus AALB002674 I 0.890
AARA001906 Anopheles arabiensis AARA001906 I 0.890
AATE014019 Anopheles atroparvus AATE014019 I 0.890
ACHR004799 Anopheles christyi ACHR004799 I 0.890
ACOM034154 Anopheles coluzzii ACOM034154 I 0.890
ACUA004590 Anopheles culicifacies ACUA004590 I 0.890
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.890
ADAC008497 Anopheles darlingi ADAC008497 I 0.890
ADIR010545 Anopheles dirus ADIR010545 I 0.890
AEPI006242 Anopheles epiroticus AEPI006242 I 0.890
AFAF002909 Anopheles farauti AFAF002909 I 0.890
AFUN008310 Anopheles funestus AFUN008310 I 0.890
AGAP001448 Anopheles gambiae AGAP001448 I 0.890
AMAM018725 Anopheles maculatus AMAM018725 I 0.890
AMEC009154 Anopheles melas AMEC009154 I 0.890
AMEM011331 Anopheles merus AMEM011331 I 0.890
AMIN003266 Anopheles minimus AMIN003266 I 0.890
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.890
ASIS019386 Anopheles sinensis ASIS019386 I 0.890
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.870
CapteG59283 Capitella teleta CapteG59283 I 0.866
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.890
CLEC012470 Cimex lectularius CLEC012470 I 0.890
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.890
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.890
csin111295 Clonorchis sinensis csin111295 I 0.894
D915_00775 Fasciola hepatica D915_00775 I 0.894
D917_00545 Trichinella nativa D917_00545 I 0.894
D918_01499 Trichuris suis D918_01499 I 0.914
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.870
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.881
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.870
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.894
EFV58245 Trichinella spiralis EFV58245 I 0.894
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.870
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.869
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.870
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.870
PTF1A Bos taurus ENSBTAG00000047315 I 0.870
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.870
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.870
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.870
ptf1a Danio rerio ENSDARG00000014479 I 0.870
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.870
PTF1A Equus caballus ENSECAG00000012711 I 0.870
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.870
PTF1A Homo sapiens ENSG00000168267 D 0.870
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.870
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.870
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.870
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.870
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.870
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.870
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.870
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.870
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.870
Ptf1a Mus musculus ENSMUSG00000026735 D 0.870
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.870
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.870
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.870
ptf1a Oryzias latipes ENSORLG00000008277 I 0.870
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.870
PTF1A Procavia capensis ENSPCAG00000005440 I 0.870
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.870
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.870
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.870
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.870
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.870
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.870
PTF1A Sus scrofa ENSSSCG00000030662 I 0.870
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.870
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.870
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.870
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.870
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.870
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.870
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.870
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.870
Fer1 Drosophila melanogaster FBgn0037475 D 0.890
GF17655 Drosophila ananassae FBgn0094673 I 0.890
GG13863 Drosophila erecta FBgn0106126 I 0.890
GH19006 Drosophila grimshawi FBgn0126473 I 0.890
GI23061 Drosophila mojavensis FBgn0145788 I 0.890
GL12422 Drosophila persimilis FBgn0150028 I 0.890
GM10936 Drosophila sechellia FBgn0165881 I 0.890
GD19915 Drosophila simulans FBgn0191398 I 0.890
GJ24574 Drosophila virilis FBgn0211653 I 0.890
GK14521 Drosophila willistoni FBgn0216527 I 0.890
GE24907 Drosophila yakuba FBgn0242002 I 0.890
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.890
HelroG86431 Helobdella robusta HelroG86431 I 0.890
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.870
ISCW003737 Ixodes scapularis ISCW003737 I 0.870
KGM_14030 Danaus plexippus KGM_14030 I 0.870
L798_11980 Zootermopsis nevadensis L798_11980 I 0.870
LCUP002382 Lucilia cuprina LCUP002382 I 0.890
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.870
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.890
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.890
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.890
LotgiG66849 Lottia gigantea LotgiG66849 I 0.870
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.870
MDOA013156 Musca domestica MDOA013156 I 0.890
MESCA008421 Megaselia scalaris MESCA008421 I 0.890
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.890
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.890
PHUM498120 Pediculus humanus PHUM498120 I 0.870
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.890
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.870
RPRC001881 Rhodnius prolixus RPRC001881 I 0.890
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.890
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.892
SMAR009985 Strigamia maritima SMAR009985 I 0.870
SMAR011911 Strigamia maritima SMAR011911 I 0.870
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.914
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.849
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.846
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.894
T265_12589 Opisthorchis viverrini T265_12589 I 0.894
TC014105 Tribolium castaneum TC014105 I 0.870
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.914
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.914
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.870
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.870
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.870