neurod6.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-969232 T051926_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.894 0.923
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.894 0.923
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.894 0.923
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.894 0.923
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.894 0.923
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.894 0.923
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.894 0.923
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.894 0.923
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.859 0.904
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.859 0.904
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.859 0.904
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.859 0.904
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.859 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAG42256 bHLH 94 146
AAI70540 bHLH 95 147

Links

Other bHLH family TFs
Other Xenopus laevis TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013544 Aedes aegypti AAEL013544 I
AATE009348 Anopheles atroparvus AATE009348 I
ACEP27848 Atta cephalotes ACEP27848 I
ACOM026725 Anopheles coluzzii ACOM026725 I
ACUA004708 Anopheles culicifacies ACUA004708 I
ACYPI004750 Acyrthosiphon pisum ACYPI004750 I
ADAC007677 Anopheles darlingi ADAC007677 I
AFAF007233 Anopheles farauti AFAF007233 I
AFUN008770 Anopheles funestus AFUN008770 I
AGAP009899 Anopheles gambiae AGAP009899 I
AMAM001551 Anopheles maculatus AMAM001551 I
AMEC014989 Anopheles melas AMEC014989 I
AMIN006836 Anopheles minimus AMIN006836 I
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I
ASIS008116 Anopheles sinensis ASIS008116 I
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I
CLEC001135 Cimex lectularius CLEC001135 I
klu Drosophila melanogaster FBgn0013469 D
GF23812 Drosophila ananassae FBgn0100806 I
GG13951 Drosophila erecta FBgn0106213 I
GH16578 Drosophila grimshawi FBgn0124049 I
GI13870 Drosophila mojavensis FBgn0136624 I
GL15747 Drosophila persimilis FBgn0153351 I
GM24789 Drosophila sechellia FBgn0179651 I
GD12837 Drosophila simulans FBgn0184562 I
GJ11729 Drosophila virilis FBgn0198983 I
GK18880 Drosophila willistoni FBgn0220878 I
GE20250 Drosophila yakuba FBgn0237569 I
GA23784 Drosophila pseudoobscura FBgn0245183 I
GB42180 Apis mellifera GB42180 I
HCOI02146900 Haemonchus contortus HCOI02146900 I
HHAL008432-PA Halyomorpha halys HHAL008432-PA I
ISCW010362 Ixodes scapularis ISCW010362 I
KGM_08766 Danaus plexippus KGM_08766 N
L798_04121 Zootermopsis nevadensis L798_04121 I
LCUP004097 Lucilia cuprina LCUP004097 I
LDEC006538 Leptinotarsa decemlineata LDEC006538 I
MCINX011334 Melitaea cinxia MCINX011334 N
MDOA010298 Musca domestica MDOA010298 I
NV17203 Nasonia vitripennis NV17203 I
PHUM540640 Pediculus humanus PHUM540640 I
PPAI001591 Phlebotomus papatasi PPAI001591 I
PTRK_0000952000 Parastrongyloides trichosuri PTRK_0000952000 I
PTRK_0001586500 Parastrongyloides trichosuri PTRK_0001586500 I
RPRC001140 Rhodnius prolixus RPRC001140 I
SINV25082 Solenopsis invicta SINV25082 I
SMAR002322 Strigamia maritima SMAR002322 I
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I
TC002783 Tribolium castaneum TC002783 I
YQE_09824 Dendroctonus ponderosae YQE_09824 I