chr5.LjT29J15.30.nc (Lotus japonicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 chr5.LjT29J15.30.nc T052058_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.LjT29J15.30.nc bHLH 189 236

Links

Other bHLH family TFs
Other Lotus japonicus TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.871
29883.m001988 Ricinus communis 29883.m001988 N 0.890
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.901
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.859
UNE12 Arabidopsis thaliana AT4G02590 N 0.859
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.860
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.860
BGIOSGA030928 Oryza indica BGIOSGA030928 N 0.853
Bo01031s030 Brassica oleracea Bo01031s030 N 0.859
Bo2g100750 Brassica oleracea Bo2g100750 N 0.859
Bo5g003580 Brassica oleracea Bo5g003580 N 0.859
Bo9g005930 Brassica oleracea Bo9g005930 N 0.859
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.859
Bra000872 Brassica rapa Bra000872 N 0.859
Bra018539 Brassica rapa Bra018539 N 0.859
Bra033368 Brassica rapa Bra033368 N 0.859
Bra036256 Brassica rapa Bra036256 N 0.859
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.860
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.860
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.840
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.859
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.859
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.859
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.859
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.871
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.884
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.890
Ca_03755 Cicer arietinum Ca_03755 N 0.901
Ca_07790 Cicer arietinum Ca_07790 N 0.890
Ca_12194 Cicer arietinum Ca_12194 N 0.890
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.890
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.881
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.890
Cla011475 Citrullus lanatus Cla011475 N 0.901
Cla015040 Citrullus lanatus Cla015040 N 0.890
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.901
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.890
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.890
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.901
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.901
evm.TU.supercontig_52.97 Carica papaya evm.TU.supercontig_52.97 N 0.854
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.859
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.859
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.878
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.901
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.890
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.890
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.890
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.901
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.890
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.901
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.890
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.863
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.863
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.890
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.901
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.860
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.860
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.848
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.848
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.848
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.842
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.860
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.860
Lus10002720.g Linum usitatissimum Lus10002720.g N 0.854
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.871
Lus10014726.g Linum usitatissimum Lus10014726.g N 0.854
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.871
Lus10018761.g Linum usitatissimum Lus10018761.g N 0.854
MDP0000176749 Malus domestica MDP0000176749 N 0.878
MDP0000295593 Malus domestica MDP0000295593 N 0.901
mgf001465m Mimulus guttatus mgf001465m N 0.863
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.890
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.901
OB07G13990 Oryza brachyantha OB07G13990 I 0.860
OBART03G37400 Oryza barthii OBART03G37400 I 0.860
OBART07G05280 Oryza barthii OBART07G05280 I 0.860
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.860
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.860
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.860
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.860
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.860
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.853
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.860
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.860
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.860
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.860
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.853
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.890
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.860
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.860
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.860
OS03G0797600 Oryza sativa OS03G0797600 I 0.860
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.860
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N 0.849
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.860
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.860
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.860
Pavir.J25149 Panicum virgatum Pavir.J25149 N 0.849
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.878
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.878
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.863
PK20184.1 Cannabis sativa PK20184.1 N 0.901
PK25419.1 Cannabis sativa PK25419.1 N 0.890
Pm003525 Prunus mume Pm003525 N 0.901
Pm020229 Prunus mume Pm020229 N 0.878
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.890
POPTR_0005s23930 Populus trichocarpa POPTR_0005s23930 N 0.863
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.901
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.878
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.890
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.863
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.860
Si030704m.g Setaria italica Si030704m.g I 0.860
Si036929m.g Setaria italica Si036929m.g I 0.860
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.876
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.863
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.878
TCM_004217 Theobroma cacao TCM_004217 N 0.890
TCM_026346 Theobroma cacao TCM_026346 N 0.901
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.859
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.859
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.840
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.901
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.890
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.901