CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g175710
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo9g175710
T057375_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.805
0.980
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.805
0.980
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.805
0.980
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.805
0.980
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.805
0.961
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.805
0.961
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN
NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.805
0.961
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.805
0.961
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.805
0.961
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.805
0.961
TGA2
M09917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.805
0.961
TGA2
M09918_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.805
0.961
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA
TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.805
0.941
HBP1B_WHEAT
M10043_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.805
0.941
TGA9
M01053_2.00
Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN
PBM
Sullivan et al.(2014)
pTH9788
0.790
0.863
TGA9
M06748_2.00
Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY
Dap-seq
OMalley et al.(2016)
TGA9_col_a
0.790
0.863
TGA9
M06749_2.00
Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA
Dap-seq
OMalley et al.(2016)
TGA9_colamp_a
0.790
0.863
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g175710.1
bZIP
40
90
KLDQKTVRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQ
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
274 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002381
Aedes aegypti
AAEL002381
N
0.000
AAEL011414
Aedes aegypti
AAEL011414
N
0.000
AAEL011425
Aedes aegypti
AAEL011425
I
0.000
AALB010797
Anopheles albimanus
AALB010797
N
0.000
AARA003413
Anopheles arabiensis
AARA003413
N
0.000
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.000
ACEP16595
Atta cephalotes
ACEP16595
I
0.000
ACHR003270
Anopheles christyi
ACHR003270
N
0.000
ACOM026236
Anopheles coluzzii
ACOM026236
N
0.000
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.000
ADAC005122
Anopheles darlingi
ADAC005122
N
0.000
ADIR000495
Anopheles dirus
ADIR000495
N
0.000
AEPI002535
Anopheles epiroticus
AEPI002535
N
0.000
AFUN009599
Anopheles funestus
AFUN009599
N
0.000
AGAP012334
Anopheles gambiae
AGAP012334
N
0.000
AMAM007083
Anopheles maculatus
AMAM007083
N
0.000
AMEC017787
Anopheles melas
AMEC017787
N
0.000
AMTR_s00046p00227790
Amborella trichopoda
AMTR_s00046p00227790
N
0.000
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.000
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.000
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.000
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.000
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.000
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.000
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.000
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.000
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.000
AQUA002990
Anopheles quadriannulatus
AQUA002990
N
0.000
ASIS014204
Anopheles sinensis
ASIS014204
N
0.000
ASU_05994
Ascaris suum
ASU_05994
N
0.000
A_01848
Schistosoma haematobium
A_01848
N
0.000
BGIBMGA005288
Bombyx mori
BGIBMGA005288
N
0.000
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.000
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.000
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.000
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.000
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.000
CapteG172235
Capitella teleta
CapteG172235
I
0.000
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.000
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.000
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.000
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.000
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.000
Cflo_11824--XP_001120264.1_APIME
Camponotus floridanus
Cflo_11824--XP_001120264.1_APIME
N
0.000
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.000
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.000
Cla009222
Citrullus lanatus
Cla009222
I
0.000
CLEC003860
Cimex lectularius
CLEC003860
I
0.000
CPIJ002952
Culex quinquefasciatus
CPIJ002952
N
0.000
CPIJ002953
Culex quinquefasciatus
CPIJ002953
N
0.000
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.000
CpipJ_CPIJ002952
Culex pipiens
CpipJ_CPIJ002952
N
0.000
CpipJ_CPIJ002953
Culex pipiens
CpipJ_CPIJ002953
N
0.000
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.000
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.000
CRE03995
Caenorhabditis remanei
CRE03995
N
0.000
CRE11852
Caenorhabditis remanei
CRE11852
N
0.000
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.000
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.000
DAPPUDRAFT_201206
Daphnia pulex
DAPPUDRAFT_201206
N
0.000
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.000
EBI_27337
Enterocytozoon bieneusi
EBI_27337
N
0.000
EBI_27667
Enterocytozoon bieneusi
EBI_27667
N
0.000
ECANG7_00770
Echinococcus canadensis
ECANG7_00770
N
0.000
EDI_049480
Entamoeba dispar
EDI_049480
N
0.000
EHI_045480
Entamoeba histolytica
EHI_045480
N
0.000
EmuJ_000894800
Echinococcus multilocularis
EmuJ_000894800
N
0.000
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.000
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.000
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.000
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.000
ETH_00031100
Eimeria tenella
ETH_00031100
I
0.000
HmgD
Drosophila melanogaster
FBgn0004362
N
0.000
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.000
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.000
HmgZ
Drosophila yakuba
FBgn0068145
I
0.000
HmgD
Drosophila yakuba
FBgn0068146
N
0.000
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.000
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.000
GF11622
Drosophila ananassae
FBgn0088662
I
0.000
GF12460
Drosophila ananassae
FBgn0089497
N
0.000
GF13265
Drosophila ananassae
FBgn0090297
N
0.000
GG19998
Drosophila erecta
FBgn0112197
N
0.000
GG20749
Drosophila erecta
FBgn0112936
I
0.000
GG22136
Drosophila erecta
FBgn0114310
N
0.000
GH20784
Drosophila grimshawi
FBgn0128247
I
0.000
GH21124
Drosophila grimshawi
FBgn0128586
N
0.000
GH21151
Drosophila grimshawi
FBgn0128613
N
0.000
GI18728
Drosophila mojavensis
FBgn0141467
N
0.000
GI18750
Drosophila mojavensis
FBgn0141489
N
0.000
GI20867
Drosophila mojavensis
FBgn0143601
I
0.000
GL11071
Drosophila persimilis
FBgn0148681
N
0.000
GL16947
Drosophila persimilis
FBgn0154551
N
0.000
GL17523
Drosophila persimilis
FBgn0155126
I
0.000
GM13209
Drosophila sechellia
FBgn0168140
N
0.000
GM15692
Drosophila sechellia
FBgn0170608
I
0.000
GM15859
Drosophila sechellia
FBgn0170775
N
0.000
GD11622
Drosophila simulans
FBgn0183362
N
0.000
GD25013
Drosophila simulans
FBgn0196325
N
0.000
GD25171
Drosophila simulans
FBgn0196483
I
0.000
GJ20604
Drosophila virilis
FBgn0207743
I
0.000
GJ21748
Drosophila virilis
FBgn0208866
N
0.000
GJ21774
Drosophila virilis
FBgn0208892
N
0.000
GK15658
Drosophila willistoni
FBgn0217663
I
0.000
GK15924
Drosophila willistoni
FBgn0217926
N
0.000
GK22092
Drosophila willistoni
FBgn0224077
N
0.000
GE11532
Drosophila yakuba
FBgn0229332
N
0.000
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.000
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.000
GB54571
Apis mellifera
GB54571
N
0.000
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.000
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.000
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.000
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.000
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.000
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.000
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.000
HMEL015307
Heliconius melpomene
HMEL015307
N
0.000
HmN_000028000
Hymenolepis microstoma
HmN_000028000
N
0.000
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.000
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.000
Hsal_00538--XP_001120264.1_APIME
Harpegnathos saltator
Hsal_00538--XP_001120264.1_APIME
N
0.000
KGM_13851
Danaus plexippus
KGM_13851
N
0.000
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.000
L798_13679
Zootermopsis nevadensis
L798_13679
N
0.000
L889_g29516
Steinernema feltiae
L889_g29516
N
0.000
L889_g9094
Steinernema feltiae
L889_g9094
N
0.000
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.000
L893_g29974
Steinernema glaseri
L893_g29974
N
0.000
L898_g4830
Steinernema monticolum
L898_g4830
N
0.000
LCUP005047
Lucilia cuprina
LCUP005047
N
0.000
LCUP016801
Lucilia cuprina
LCUP016801
N
0.000
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.000
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.000
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.000
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.000
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.000
MCINX001064
Melitaea cinxia
MCINX001064
I
0.000
MDOA007633
Musca domestica
MDOA007633
N
0.000
MDOA009531
Musca domestica
MDOA009531
N
0.000
MDOA014797
Musca domestica
MDOA014797
I
0.000
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.000
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.000
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.000
Minc03634
Meloidogyne incognita
Minc03634
N
0.000
Minc04648
Meloidogyne incognita
Minc04648
N
0.000
ML09221a
Mnemiopsis leidyi
ML09221a
N
0.000
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.000
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.000
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.000
NCU02819
Neurospora crassa
NCU02819
D
0.000
NECAME_16525
Necator americanus
NECAME_16525
N
0.000
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.000
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.000
NV15871
Nasonia vitripennis
NV15871
N
0.000
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.000
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.000
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.000
PK08788.1
Cannabis sativa
PK08788.1
N
0.000
Pm006054
Prunus mume
Pm006054
I
0.000
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.000
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.000
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.000
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.000
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.000
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.000
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.000
RPRC006380
Rhodnius prolixus
RPRC006380
I
0.000
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.000
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.000
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.000
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.000
SCUD_0000070901
Schistosoma curassoni
SCUD_0000070901
N
0.000
Sjc_0035580
Schistosoma japonicum
Sjc_0035580
N
0.000
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.000
Smp_148930
Schistosoma mansoni
Smp_148930
N
0.000
SMTD_0001155301
Schistosoma mattheei
SMTD_0001155301
N
0.000
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.000
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.000
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.000
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.000
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.000
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.000
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.000
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.000
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.000
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.000
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.000
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.000
TC012866
Tribolium castaneum
TC012866
N
0.000
TCM_007659
Theobroma cacao
TCM_007659
I
0.000
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.000
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.000
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.000
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.000
TsM_000111500
Taenia solium
TsM_000111500
N
0.000
TTAC_0000692101
Hydatigera taeniaeformis
TTAC_0000692101
N
0.000
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.000
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.000
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.000
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.000
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.000
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.000
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.000
X797_001988
Metarhizium robertsii
X797_001988
I
0.000
YQE_02071
Dendroctonus ponderosae
YQE_02071
N
0.000