Bra003500 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra003500 T057402_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP53
M06779_2.00 		Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH		 Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a 		0.888 0.889
BZIP53
M06780_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP53_col 		0.888 0.889
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003500.1-P bZIP 18 80

Links

Other bZIP family TFs
Other Brassica rapa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
23216_YHR006W Saccharomyces bayanus 23216_YHR006W I
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I
5542_YDR463W Saccharomyces paradoxus 5542_YDR463W I
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I
AACERI_AaceriAFR531W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR531W I
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I
AGOS_AFR531W Ashbya gossypii AGOS_AFR531W I
CAGL0E04312g Candida glabrata CAGL0E04312g I
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I
estExt_fgenesh1_pg.C_chr_1.20297 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20297 I
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I
KAFR_0C05710 Kazachstania africana KAFR_0C05710 I
KLLA0_F10109g Kluyveromyces lactis KLLA0_F10109g I
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I
KNAG_0C06030 Kazachstania naganishii KNAG_0C06030 I
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I
Kwal_18337 Kluyveromyces waltii Kwal_18337 I
NCAS_0A07900 Naumovozyma castellii NCAS_0A07900 N
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I
PICST_66679 Scheffersomyces stipitis PICST_66679 I
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I
Scas_Contig660.12 Saccharomyces castellii Scas_Contig660.12 N
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I
SU7_2774 Saccharomyces arboricola SU7_2774 I
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I
YALI0_E24937g Yarrowia lipolytica YALI0_E24937g N
STP1 Saccharomyces cerevisiae YDR463W D