Bra010010 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra010010 T057429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.831 0.774
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.822 0.694
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.808 0.903
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.801 0.645
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.793 0.726
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.793 0.726
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010010.1-P bZIP 152 213

Links

Other bZIP family TFs
Other Brassica rapa TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I 0.832
29883.m001986 Ricinus communis 29883.m001986 I 0.786
30138.m003866 Ricinus communis 30138.m003866 I 0.787
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.820
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.831
BZIP63 Arabidopsis thaliana AT5G28770 D 0.826
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.801
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.801
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.821
Bo2g151850 Brassica oleracea Bo2g151850 I 0.831
Bo7g093030 Brassica oleracea Bo7g093030 I 0.874
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.806
Bra020620 Brassica rapa Bra020620 I 0.874
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.808
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.808
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.796
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.833
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.787
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N 0.794
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.787
Ca_01234 Cicer arietinum Ca_01234 I 0.797
Ca_03753 Cicer arietinum Ca_03753 I 0.831
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.787
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.789
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.827
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.788
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.828
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.787
Cla011478 Citrullus lanatus Cla011478 I 0.814
Cla015037 Citrullus lanatus Cla015037 I 0.820
Cla020112 Citrullus lanatus Cla020112 I 0.829
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.793
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.829
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.823
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.820
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.829
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.822
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.798
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.795
EuGene.1500010323 Micromonas sp RCC299 EuGene.1500010323 I 0.797
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.800
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.865
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.835
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.787
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.835
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.801
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.835
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.801
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I 0.802
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.831
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.848
GRMZM2G073427 Zea mays GRMZM2G073427 I 0.806
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.801
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.819
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.787
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.835
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.808
gw1.189.102.1 Physcomitrella patens gw1.189.102.1 I 0.796
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I 0.801
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.826
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.786
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.799
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.852
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.844
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.837
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.793
MDP0000176747 Malus domestica MDP0000176747 I 0.803
MDP0000270365 Malus domestica MDP0000270365 I 0.821
mgf007535m Mimulus guttatus mgf007535m I 0.782
mgf009803m Mimulus guttatus mgf009803m I 0.832
mgf012838m Mimulus guttatus mgf012838m I 0.822
mgf013074m Mimulus guttatus mgf013074m I 0.782
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.797
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.787
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.806
OB12G24740 Oryza brachyantha OB12G24740 I 0.813
OBART02G05680 Oryza barthii OBART02G05680 I 0.801
OBART02G11580 Oryza barthii OBART02G11580 I 0.801
OBART12G18120 Oryza barthii OBART12G18120 I 0.821
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.801
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.801
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.821
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.801
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.801
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.801
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.801
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.821
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.801
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.852
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.835
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.828
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.788
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.787
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.801
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.801
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.801
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.801
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.821
OS02G0175100 Oryza sativa OS02G0175100 I 0.801
OS02G0266800 Oryza sativa OS02G0266800 D 0.801
OS12G0601800 Oryza sativa OS12G0601800 I 0.821
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.801
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.801
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.811
Pavir.Cb00258 Panicum virgatum Pavir.Cb00258 I 0.791
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.816
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.786
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.787
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.835
PK05128.1 Cannabis sativa PK05128.1 D 0.831
PK09738.1 Cannabis sativa PK09738.1 I 0.795
PK11472.1 Cannabis sativa PK11472.1 I 0.798
Pm003522 Prunus mume Pm003522 I 0.793
Pm020231 Prunus mume Pm020231 I 0.803
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.783
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.787
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.787
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.835
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.803
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.798
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.786
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.790
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.835
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.833
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.801
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.826
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I 0.790
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I 0.790
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.785
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.785
Si017778m.g Setaria italica Si017778m.g I 0.801
Si022331m.g Setaria italica Si022331m.g I 0.789
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.835
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.787
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.797
TCM_026349 Theobroma cacao TCM_026349 I 0.833
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.851
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I 0.820
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I 0.788
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.835