CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EMBP1_WHEAT
(
Triticum aestivum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
EMBP1_WHEAT
T058816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EMBP1_WHEAT
M09921_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
(Direct)
(Direct)
EMBP1_WHEAT
M09922_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW
WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.907
1.000
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.814
0.609
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.814
0.609
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.814
0.609
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.814
0.609
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.814
0.609
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.810
0.641
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.810
0.641
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.798
0.625
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.798
0.625
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.790
0.594
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.790
0.594
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.785
0.625
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.785
0.688
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.783
0.578
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.782
0.609
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMBP1_WHEAT
bZIP
248
311
ERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENK
Links
Other
bZIP
family TFs
Other
Triticum aestivum
TFs
206 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA001121
Oryza indica
BGIOSGA001121
N
0.000
BRADI2G45117
Brachypodium distachyon
BRADI2G45117
N
0.000
GRMZM2G001426
Zea mays
GRMZM2G001426
N
0.000
MLOC_73617
Hordeum vulgare
MLOC_73617
N
0.000
OB01G33730
Oryza brachyantha
OB01G33730
N
0.000
OBART01G24520
Oryza barthii
OBART01G24520
N
0.000
OGLUM01G28380
Oryza glumaepatula
OGLUM01G28380
N
0.000
OMERI01G24610
Oryza meridionalis
OMERI01G24610
N
0.000
ONIVA01G27720
Oryza nivara
ONIVA01G27720
N
0.000
OPUNC01G24550
Oryza punctata
OPUNC01G24550
N
0.000
ORGLA01G0197900
Oryza glaberrima
ORGLA01G0197900
N
0.000
ORUFI01G27440
Oryza rufipogon
ORUFI01G27440
N
0.000
OS01G0646300
Oryza sativa
OS01G0646300
N
0.000
Pavir.J09720
Panicum virgatum
Pavir.J09720
N
0.000
Pavir.J11985
Panicum virgatum
Pavir.J11985
N
0.000
Sb03g029470
Sorghum bicolor
Sb03g029470
N
0.000
Si001293m.g
Setaria italica
Si001293m.g
N
0.000
TRAES3BF178300020CFD_g
Triticum aestivum
TRAES3BF178300020CFD_g
N
0.000