ATF3 (Procavia capensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSPCAG00000000178 T060964_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.918 0.903
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.918 0.903
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.918 0.903
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.892 0.710
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.892 0.710
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.892 0.710
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.892 0.710
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.892 0.710
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.892 0.710
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.892 0.710
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.892 0.710
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.892 0.710
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.892 0.710
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.892 0.710
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.892 0.710
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.890 0.710
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.890 0.710
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.890 0.710
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.890 0.710
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.890 0.710
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.812 0.516
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.812 0.516
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.812 0.516
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.812 0.516
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.812 0.516
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.812 0.516
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.812 0.516
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.812 0.516
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.812 0.516
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.812 0.516
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.812 0.516
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.812 0.516
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.812 0.516
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.812 0.516
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.812 0.516
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.812 0.516
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.812 0.516
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.812 0.516
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.812 0.516
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.800 0.548
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000000159 bZIP 66 127

Links

Other bZIP family TFs
Other Procavia capensis TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008139 Ailuropoda melanoleuca ENSAMEG00000008139 I
ZNF641 Bos taurus ENSBTAG00000016496 I
ZNF641 Canis familiaris ENSCAFG00000009010 I
ZNF641 Callithrix jacchus ENSCJAG00000020716 I
ZNF641 Cavia porcellus ENSCPOG00000002770 I
ENSCSAG00000006278 Chlorocebus sabaeus ENSCSAG00000006278 I
ZNF641 Dasypus novemcinctus ENSDNOG00000014189 I
Zfp641 Dipodomys ordii ENSDORG00000011810 I
ZNF641 Equus caballus ENSECAG00000022720 I
ZNF641 Erinaceus europaeus ENSEEUG00000002648 I
ZNF641 Echinops telfairi ENSETEG00000017660 I
ZNF641 Felis catus ENSFCAG00000001972 I
ZNF641 Homo sapiens ENSG00000167528 D
ZNF641 Gorilla gorilla ENSGGOG00000013643 I
ZNF641 Loxodonta africana ENSLAFG00000029324 I
ZNF641 Microcebus murinus ENSMICG00000007360 I
ZNF641 Myotis lucifugus ENSMLUG00000003695 I
ZNF641 Macaca mulatta ENSMMUG00000014484 I
ENSMMUP00000019015 Macaca fascicularis ENSMMUP00000019015 I
ENSMPUG00000000169 Mustela putorius furo ENSMPUG00000000169 I
Zfp641 Mus musculus ENSMUSG00000022987 I
ENSNLEG00000017881 Nomascus leucogenys ENSNLEG00000017881 I
ENSOARG00000019279 Ovis aries ENSOARG00000019279 I
ZNF641 Oryctolagus cuniculus ENSOCUG00000005451 I
ENSP00000301042-D1 Bos grunniens ENSP00000301042-D1 I
ENSPANG00000014075 Papio anubis ENSPANG00000014075 I
ZNF641 Procavia capensis ENSPCAG00000005206 I
ENSPPYG00000004457 Pongo abelii ENSPPYG00000004457 I
ZNF641 Pan troglodytes ENSPTRG00000004878 I
Zfp641 Rattus norvegicus ENSRNOG00000032447 I
ZNF641 Sorex araneus ENSSARG00000009301 I
ZNF641 Sus scrofa ENSSSCG00000021654 I
ENSSTOG00000001970 Ictidomys tridecemlineatus ENSSTOG00000001970 I
ZNF641 Tupaia belangeri ENSTBEG00000002375 I
ENSTSYG00000001375 Tarsius syrichta ENSTSYG00000001375 I
ZNF641 Tursiops truncatus ENSTTRG00000015952 I
Myotis_brandtii_ZNF641_10022121 Myotis brandtii Myotis_brandtii_ZNF641_10022121 I