CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr3G07000_001
(
Musa acuminata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
GSMUA_Achr3G07000_001
T063257_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN
NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.830
0.754
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.814
0.590
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.814
0.590
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.813
0.721
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.813
0.721
ABF4
M09911_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.813
0.721
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.810
0.770
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.810
0.770
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.805
0.623
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.805
0.623
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.805
0.623
ABF1
M09906_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.805
0.623
ABF1
M09907_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.805
0.623
ABF1
M09908_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.805
0.623
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.782
0.639
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr3P07000_001
bZIP
323
383
LERRQRRMIKNRESAARSRDRKQAYTMKLEAEVAKLQELNQELNKKQAELMEMQKDQMSEM
Links
Other
bZIP
family TFs
Other
Musa acuminata
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29801.m003176
Ricinus communis
29801.m003176
I
0.805
30055.m001548
Ricinus communis
30055.m001548
I
0.782
30170.m013868
Ricinus communis
30170.m013868
I
0.825
AMTR_s00114p00031980
Amborella trichopoda
AMTR_s00114p00031980
I
0.787
AMTR_s00132p00065700
Amborella trichopoda
AMTR_s00132p00065700
I
0.822
ABF2
Arabidopsis thaliana
AT1G45249
D
0.810
ABF1
Arabidopsis thaliana
AT1G49720
D
0.805
ABF4
Arabidopsis thaliana
AT3G19290
D
0.813
ABF3
Arabidopsis thaliana
AT4G34000
D
0.814
BGIOSGA005551
Oryza indica
BGIOSGA005551
I
0.798
BGIOSGA028831
Oryza indica
BGIOSGA028831
I
0.786
BGIOSGA030899
Oryza indica
BGIOSGA030899
I
0.837
Bo1g007700
Brassica oleracea
Bo1g007700
I
0.811
Bo1g114840
Brassica oleracea
Bo1g114840
I
0.784
Bo3g073080
Brassica oleracea
Bo3g073080
I
0.816
Bo5g115300
Brassica oleracea
Bo5g115300
I
0.818
Bo6g006970
Brassica oleracea
Bo6g006970
I
0.810
Bo7g116570
Brassica oleracea
Bo7g116570
I
0.803
Bostr.12302s0127
Boechera stricta
Bostr.12302s0127
I
0.783
Bostr.19424s0732
Boechera stricta
Bostr.19424s0732
I
0.820
Bostr.26675s0197
Boechera stricta
Bostr.26675s0197
I
0.787
Bostr.7867s1253
Boechera stricta
Bostr.7867s1253
I
0.814
Bra022409
Brassica rapa
Bra022409
I
0.818
Bra037533
Brassica rapa
Bra037533
I
0.818
Bra040260
Brassica rapa
Bra040260
I
0.810
BRADI3G38200
Brachypodium distachyon
BRADI3G38200
I
0.800
BRADI4G32090
Brachypodium distachyon
BRADI4G32090
I
0.788
Cagra.10917s0002
Capsella grandiflora
Cagra.10917s0002
I
0.799
Cagra.1305s0026
Capsella grandiflora
Cagra.1305s0026
I
0.814
Cagra.2481s0016
Capsella grandiflora
Cagra.2481s0016
I
0.809
Cagra.4978s0002
Capsella grandiflora
Cagra.4978s0002
I
0.813
Carubv10006251m.g
Capsella rubella
Carubv10006251m.g
I
0.814
Carubv10009177m.g
Capsella rubella
Carubv10009177m.g
I
0.799
Carubv10009399m.g
Capsella rubella
Carubv10009399m.g
I
0.785
Carubv10013729m.g
Capsella rubella
Carubv10013729m.g
I
0.813
cassava12275.valid.m1
Manihot esculenta
cassava12275.valid.m1
I
0.825
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
0.783
cassava42669.valid.m1
Manihot esculenta
cassava42669.valid.m1
I
0.825
cassava42743.valid.m1
Manihot esculenta
cassava42743.valid.m1
I
0.817
cassava42744.valid.m1
Manihot esculenta
cassava42744.valid.m1
I
0.817
cassava42745.valid.m1
Manihot esculenta
cassava42745.valid.m1
I
0.817
Ca_01548
Cicer arietinum
Ca_01548
I
0.827
Ca_06458
Cicer arietinum
Ca_06458
I
0.785
Ciclev10001159m.g
Citrus clementina
Ciclev10001159m.g
I
0.822
Ciclev10028435m.g
Citrus clementina
Ciclev10028435m.g
I
0.823
Cla016272
Citrullus lanatus
Cla016272
I
0.811
Cla022926
Citrullus lanatus
Cla022926
I
0.799
Cucsa.219780
Cucumis sativus
Cucsa.219780
I
0.811
Cucsa.396070
Cucumis sativus
Cucsa.396070
I
0.799
Eucgr.F02337
Eucalyptus grandis
Eucgr.F02337
I
0.825
Eucgr.G01436
Eucalyptus grandis
Eucgr.G01436
I
0.790
Eucgr.I01145
Eucalyptus grandis
Eucgr.I01145
I
0.782
evm.TU.supercontig_49.26
Carica papaya
evm.TU.supercontig_49.26
I
0.822
evm.TU.supercontig_62.4
Carica papaya
evm.TU.supercontig_62.4
I
0.814
ABF2
Arabidopsis lyrata
fgenesh2_kg.1__3804__AT1G45249.1
I
0.810
ABF1
Arabidopsis lyrata
fgenesh2_kg.1__4055__AT1G49720.1
I
0.802
ABF4
Arabidopsis lyrata
fgenesh2_kg.3__2145__AT3G19290.1
I
0.813
ABF3
Arabidopsis lyrata
fgenesh2_kg.7__705__AT4G34000.1
I
0.814
gene09110-v1.0-hybrid
Fragaria vesca
gene09110-v1.0-hybrid
I
0.792
gene28250-v1.0-hybrid
Fragaria vesca
gene28250-v1.0-hybrid
I
0.818
GLYMA04G04170
Glycine max
GLYMA04G04170
I
0.827
GLYMA06G04353
Glycine max
GLYMA06G04353
I
0.827
GLYMA07G33600
Glycine max
GLYMA07G33600
I
0.786
Gorai.005G102300
Gossypium raimondii
Gorai.005G102300
I
0.820
Gorai.005G237400
Gossypium raimondii
Gorai.005G237400
I
0.812
Gorai.008G024700
Gossypium raimondii
Gorai.008G024700
I
0.806
Gorai.009G212600
Gossypium raimondii
Gorai.009G212600
I
0.786
Gorai.009G275700
Gossypium raimondii
Gorai.009G275700
I
0.796
Gorai.013G044500
Gossypium raimondii
Gorai.013G044500
I
0.830
GRMZM2G002075
Zea mays
GRMZM2G002075
I
0.827
GRMZM2G157722
Zea mays
GRMZM2G157722
I
0.790
GRMZM2G478417
Zea mays
GRMZM2G478417
I
0.790
GSMUA_Achr5G05690_001
Musa acuminata
GSMUA_Achr5G05690_001
I
0.805
GSMUA_Achr5G24570_001
Musa acuminata
GSMUA_Achr5G24570_001
I
0.790
GSMUA_Achr6G04270_001
Musa acuminata
GSMUA_Achr6G04270_001
I
0.801
GSMUA_Achr6G30550_001
Musa acuminata
GSMUA_Achr6G30550_001
I
0.818
GSMUA_Achr9G27130_001
Musa acuminata
GSMUA_Achr9G27130_001
I
0.811
LjT07K13.110.nd
Lotus japonicus
LjT07K13.110.nd
I
0.785
LPERR08G14740
Leersia perrieri
LPERR08G14740
I
0.792
LPERR09G09170
Leersia perrieri
LPERR09G09170
I
0.842
Lus10002399.g
Linum usitatissimum
Lus10002399.g
I
0.805
Lus10014066.g
Linum usitatissimum
Lus10014066.g
I
0.805
Lus10027897.g
Linum usitatissimum
Lus10027897.g
I
0.801
MDP0000248567
Malus domestica
MDP0000248567
I
0.830
MDP0000296303
Malus domestica
MDP0000296303
I
0.804
mgf002047m
Mimulus guttatus
mgf002047m
I
0.811
mgf002176m
Mimulus guttatus
mgf002176m
I
0.797
mgf007524m
Mimulus guttatus
mgf007524m
I
0.811
mgf014602m
Mimulus guttatus
mgf014602m
I
0.811
mgf020824m
Mimulus guttatus
mgf020824m
I
0.819
MLOC_66546
Hordeum vulgare
MLOC_66546
I
0.798
MTR_3g101780
Medicago truncatula
MTR_3g101780
I
0.825
OB08G24950
Oryza brachyantha
OB08G24950
I
0.820
OB09G19140
Oryza brachyantha
OB09G19140
I
0.796
OBART02G33770
Oryza barthii
OBART02G33770
I
0.797
OGLUM02G34210
Oryza glumaepatula
OGLUM02G34210
I
0.798
OGLUM09G13130
Oryza glumaepatula
OGLUM09G13130
I
0.837
OLONG_001053
Oryza longistaminata
OLONG_001053
I
0.785
OMERI02G32150
Oryza meridionalis
OMERI02G32150
I
0.798
OMERI09G10130
Oryza meridionalis
OMERI09G10130
I
0.837
ONIVA02G33490
Oryza nivara
ONIVA02G33490
I
0.798
OPUNC08G15700
Oryza punctata
OPUNC08G15700
I
0.786
OPUNC09G11090
Oryza punctata
OPUNC09G11090
I
0.837
orange1.1g013197m.g
Citrus sinensis
orange1.1g013197m.g
I
0.823
orange1.1g021624m.g
Citrus sinensis
orange1.1g021624m.g
I
0.822
orange1.1g025340m.g
Citrus sinensis
orange1.1g025340m.g
I
0.822
ORGLA02G0292000
Oryza glaberrima
ORGLA02G0292000
I
0.798
ORGLA08G0211300
Oryza glaberrima
ORGLA08G0211300
I
0.786
ORGLA09G0097200
Oryza glaberrima
ORGLA09G0097200
I
0.837
ORUFI02G35260
Oryza rufipogon
ORUFI02G35260
I
0.798
ORUFI08G19970
Oryza rufipogon
ORUFI08G19970
I
0.786
ORUFI12G20810
Oryza rufipogon
ORUFI12G20810
I
0.787
BZIP23
Oryza sativa
OS02G0766700
I
0.798
BZIP46
Oryza sativa
OS06G0211200
I
0.787
OS08G0471950
Oryza sativa
OS08G0471950
D
0.782
OS09G0456200
Oryza sativa
OS09G0456200
I
0.837
Pavir.Ba02029
Panicum virgatum
Pavir.Ba02029
I
0.822
Pavir.Fa00674
Panicum virgatum
Pavir.Fa00674
I
0.820
Pavir.Fb01750
Panicum virgatum
Pavir.Fb01750
I
0.814
Pavir.J00256
Panicum virgatum
Pavir.J00256
I
0.805
PGSC0003DMG400006211
Solanum tuberosum
PGSC0003DMG400006211
I
0.817
PGSC0003DMG400008011
Solanum tuberosum
PGSC0003DMG400008011
I
0.822
PGSC0003DMG400022931
Solanum tuberosum
PGSC0003DMG400022931
I
0.824
PGSC0003DMG400025889
Solanum tuberosum
PGSC0003DMG400025889
I
0.809
PK02169.1
Cannabis sativa
PK02169.1
I
0.824
PK18009.1
Cannabis sativa
PK18009.1
D
0.830
Pm005288
Prunus mume
Pm005288
I
0.790
Pm021430
Prunus mume
Pm021430
I
0.816
POPTR_0002s12710
Populus trichocarpa
POPTR_0002s12710
I
0.825
POPTR_0009s10400
Populus trichocarpa
POPTR_0009s10400
I
0.818
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
0.784
POPTR_0014s02810
Populus trichocarpa
POPTR_0014s02810
I
0.825
PRUPE_ppa006752mg
Prunus persica
PRUPE_ppa006752mg
I
0.816
SapurV1A.0167s0060
Salix purpurea
SapurV1A.0167s0060
I
0.825
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
0.784
SapurV1A.0643s0160
Salix purpurea
SapurV1A.0643s0160
I
0.823
SapurV1A.0878s0160
Salix purpurea
SapurV1A.0878s0160
I
0.825
SapurV1A.3185s0030
Salix purpurea
SapurV1A.3185s0030
I
0.823
Sb04g034190
Sorghum bicolor
Sb04g034190
I
0.800
Sb07g022965
Sorghum bicolor
Sb07g022965
I
0.805
Si013904m.g
Setaria italica
Si013904m.g
I
0.820
Si030114m.g
Setaria italica
Si030114m.g
I
0.827
Solyc01g108080.2
Solanum lycopersicum
Solyc01g108080.2
I
0.809
Solyc04g078840.2
Solanum lycopersicum
Solyc04g078840.2
I
0.788
Solyc10g050210.1
Solanum lycopersicum
Solyc10g050210.1
I
0.801
Solyc11g044560.1
Solanum lycopersicum
Solyc11g044560.1
I
0.824
TCM_007074
Theobroma cacao
TCM_007074
I
0.830
TCM_033824
Theobroma cacao
TCM_033824
I
0.799
Thhalv10011493m.g
Eutrema salsugineum
Thhalv10011493m.g
I
0.810
Thhalv10012271m.g
Eutrema salsugineum
Thhalv10012271m.g
I
0.801
Thhalv10020772m.g
Eutrema salsugineum
Thhalv10020772m.g
I
0.818
Thhalv10025203m.g
Eutrema salsugineum
Thhalv10025203m.g
I
0.797
TRAES3BF099600130CFD_g
Triticum aestivum
TRAES3BF099600130CFD_g
I
0.785
TRIUR3_26781
Triticum urartu
TRIUR3_26781
I
0.790
VIT_03s0063g00310
Vitis vinifera
VIT_03s0063g00310
I
0.796
ABF2
Vitis vinifera
VIT_18s0001g10450
I
0.829