CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g007090
(
Sorghum bicolor
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Sb10g007090
T067744_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.797
0.702
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.790
0.684
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.790
0.684
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.784
0.754
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.784
0.754
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g007090.1
bZIP
266
323
VERRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKDQNDELQKKQVEMLKKQKDEK
Links
Other
bZIP
family TFs
Other
Sorghum bicolor
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30055.m001548
Ricinus communis
30055.m001548
I
0.000
DPBF2
Arabidopsis thaliana
AT3G44460
I
0.000
Bo3g122120
Brassica oleracea
Bo3g122120
I
0.000
Bostr.0556s0737
Boechera stricta
Bostr.0556s0737
I
0.000
Bra019436
Brassica rapa
Bra019436
I
0.000
BRADI2G55550
Brachypodium distachyon
BRADI2G55550
I
0.000
Cagra.2192s0012
Capsella grandiflora
Cagra.2192s0012
I
0.000
Carubv10019243m.g
Capsella rubella
Carubv10019243m.g
I
0.000
cassava16074.m1
Manihot esculenta
cassava16074.m1
I
0.000
Gorai.013G258300
Gossypium raimondii
Gorai.013G258300
I
0.000
MTR_6g026800
Medicago truncatula
MTR_6g026800
I
0.000
PK24205.1
Cannabis sativa
PK24205.1
D
0.000
POPTR_0009s16610
Populus trichocarpa
POPTR_0009s16610
I
0.000
SapurV1A.0374s0070
Salix purpurea
SapurV1A.0374s0070
I
0.000
Thhalv10011159m.g
Eutrema salsugineum
Thhalv10011159m.g
I
0.000