CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_3DL_A71427183
(
Triticum aestivum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Traes_3DL_A71427183
T068676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.787
0.900
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.787
0.900
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA
TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.787
0.900
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.787
0.900
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.787
0.900
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.787
0.880
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.787
0.880
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN
NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.787
0.880
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.787
0.880
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.787
0.880
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.787
0.880
TGA2
M09917_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.787
0.880
TGA2
M09918_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.787
0.880
HBP1B_WHEAT
M10043_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.787
0.860
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_3DL_A71427183.1
bZIP
149
198
LDHKSLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQELQRARQQ
Links
Other
bZIP
family TFs
Other
Triticum aestivum
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF118
Arabidopsis thaliana
AT1G68550
D
0.000
CRF5
Arabidopsis thaliana
AT2G46310
I
0.000
CRF6
Arabidopsis thaliana
AT3G61630
I
0.000
CRF4
Arabidopsis thaliana
AT4G27950
D
0.000
Bo6g077880
Brassica oleracea
Bo6g077880
I
0.000
Bo8g096140
Brassica oleracea
Bo8g096140
I
0.000
Bostr.25993s0138
Boechera stricta
Bostr.25993s0138
I
0.000
Bra003462
Brassica rapa
Bra003462
I
0.000
Cagra.0050s0068
Capsella grandiflora
Cagra.0050s0068
I
0.000
Cagra.0483s0087
Capsella grandiflora
Cagra.0483s0087
I
0.000
Cagra.1225s0103
Capsella grandiflora
Cagra.1225s0103
I
0.000
Carubv10005229m.g
Capsella rubella
Carubv10005229m.g
I
0.000
Carubv10017705m.g
Capsella rubella
Carubv10017705m.g
I
0.000
Carubv10023769m.g
Capsella rubella
Carubv10023769m.g
I
0.000
chr6.LjT13N05.60.nc
Lotus japonicus
chr6.LjT13N05.60.nc
I
0.000
CRF5
Arabidopsis lyrata
fgenesh2_kg.4__2841__AT2G46310.1
I
0.000
CRF6
Arabidopsis lyrata
fgenesh2_kg.5__2643__AT3G61630.1
I
0.000
GLYMA10G42130
Glycine max
GLYMA10G42130
I
0.000
GLYMA14G38610
Glycine max
GLYMA14G38610
I
0.000
Gorai.001G156900
Gossypium raimondii
Gorai.001G156900
I
0.000
Gorai.007G105600
Gossypium raimondii
Gorai.007G105600
I
0.000
Gorai.007G105700
Gossypium raimondii
Gorai.007G105700
I
0.000
LjSGA_008718.1
Lotus japonicus
LjSGA_008718.1
I
0.000
LjSGA_016572.1
Lotus japonicus
LjSGA_016572.1
I
0.000
LjSGA_132504.1
Lotus japonicus
LjSGA_132504.1
I
0.000
PRUPE_ppa018978mg
Prunus persica
PRUPE_ppa018978mg
N
0.000
CRF4
Arabidopsis lyrata
scaffold_701473.1
I
0.000
TCM_005203
Theobroma cacao
TCM_005203
I
0.000
Thhalv10001561m.g
Eutrema salsugineum
Thhalv10001561m.g
I
0.000
VIT_01s0011g03470
Vitis vinifera
VIT_01s0011g03470
I
0.000