CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cla022576
(
Citrullus lanatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cla022576
T070054_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05128.1
M01154_2.00
Cannabis sativa
NNNDBGTRKN
NMYACVHNNN
PBM
Lambert et al.(2019)
pTH10099
0.789
0.635
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla022576
bZIP
160
222
LALKRIRRMISNRDSARRSRRRKQAHLAELENQVKQLKGENETLFNQLLDASQQYRDANTNNR
Links
Other
bZIP
family TFs
Other
Citrullus lanatus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00002p00268140
Amborella trichopoda
AMTR_s00002p00268140
I
0.786
cassava18334.valid.m1
Manihot esculenta
cassava18334.valid.m1
I
0.791
Ca_03753
Cicer arietinum
Ca_03753
I
0.789
Ciclev10008515m.g
Citrus clementina
Ciclev10008515m.g
I
0.851
Ciclev10020133m.g
Citrus clementina
Ciclev10020133m.g
I
0.788
Cla011478
Citrullus lanatus
Cla011478
I
0.790
Cla020112
Citrullus lanatus
Cla020112
I
0.827
Cucsa.133290
Cucumis sativus
Cucsa.133290
I
0.827
Cucsa.161540
Cucumis sativus
Cucsa.161540
I
0.897
Cucsa.289120
Cucumis sativus
Cucsa.289120
I
0.810
Eucgr.C03986
Eucalyptus grandis
Eucgr.C03986
I
0.827
gene08757-v1.0-hybrid
Fragaria vesca
gene08757-v1.0-hybrid
I
0.802
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
0.789
Gorai.007G277300
Gossypium raimondii
Gorai.007G277300
I
0.785
GRMZM2G103647
Zea mays
GRMZM2G103647
I
0.782
GSMUA_Achr10G08670_001
Musa acuminata
GSMUA_Achr10G08670_001
I
0.787
Lus10006590.g
Linum usitatissimum
Lus10006590.g
I
0.784
mgf007535m
Mimulus guttatus
mgf007535m
I
0.798
mgf012838m
Mimulus guttatus
mgf012838m
I
0.783
mgf013074m
Mimulus guttatus
mgf013074m
I
0.798
orange1.1g013166m.g
Citrus sinensis
orange1.1g013166m.g
I
0.788
orange1.1g015739m.g
Citrus sinensis
orange1.1g015739m.g
I
0.851
Pavir.Db00496
Panicum virgatum
Pavir.Db00496
I
0.782
PK05128.1
Cannabis sativa
PK05128.1
D
0.789
PK09738.1
Cannabis sativa
PK09738.1
I
0.786
Pm005087
Prunus mume
Pm005087
I
0.804
PRUPE_ppa007814mg
Prunus persica
PRUPE_ppa007814mg
I
0.804
Sb10g026450
Sorghum bicolor
Sb10g026450
I
0.782
Si007043m.g
Setaria italica
Si007043m.g
I
0.782
Thhalv10004701m.g
Eutrema salsugineum
Thhalv10004701m.g
I
0.782
ATBZIP9
Vitis vinifera
VIT_04s0008g02750
I
0.832