Ciclev10002059m.g (Citrus clementina)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Ciclev10002059m.g T071619_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.789 0.686
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10002059m bZIP 206 269
Ciclev10002172m bZIP 206 256
Ciclev10002334m bZIP 206 235

Links

Other bZIP family TFs
Other Citrus clementina TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29863.m001047 Ricinus communis 29863.m001047 N 0.812
29955.m001177 Ricinus communis 29955.m001177 I 0.797
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.811
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.822
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.787
GBF4 Arabidopsis thaliana AT1G03970 N 0.850
AT5G44080 Arabidopsis thaliana AT5G44080 N 0.803
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.791
Bo5g004230 Brassica oleracea Bo5g004230 N 0.826
Bo7g067030 Brassica oleracea Bo7g067030 N 0.815
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.840
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N 0.803
Bra015281 Brassica rapa Bra015281 N 0.826
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.800
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N 0.797
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.842
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.842
Carubv10027647m.g Capsella rubella Carubv10027647m.g N 0.803
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I 0.821
Ca_04375 Cicer arietinum Ca_04375 N 0.864
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.852
Cla014026 Citrullus lanatus Cla014026 N 0.806
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.879
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.865
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.850
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N 0.803
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N 0.820
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.790
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.808
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.853
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.813
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.793
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.789
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.789
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.818
MDP0000208334 Malus domestica MDP0000208334 N 0.814
mgf008848m Mimulus guttatus mgf008848m N 0.859
mgf015540m Mimulus guttatus mgf015540m I 0.820
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.800
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.809
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.787
OB05G25740 Oryza brachyantha OB05G25740 I 0.789
OBART05G17920 Oryza barthii OBART05G17920 I 0.801
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.789
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.789
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.791
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.785
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.880
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.789
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.791
OS05G0437700 Oryza sativa OS05G0437700 I 0.789
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.813
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.797
PK16522.1 Cannabis sativa PK16522.1 N 0.860
PK22350.1 Cannabis sativa PK22350.1 N 0.821
Pm022545 Prunus mume Pm022545 I 0.818
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I 0.827
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.827
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.827
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.827
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I 0.821
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.813
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.811
Si003247m.g Setaria italica Si003247m.g I 0.813
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.820
TCM_035623 Theobroma cacao TCM_035623 N 0.880
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N 0.807
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.827
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.788
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.808
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.864