Pavir.Ea01074 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ea01074 T072369_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA6
M01780_2.00 		Arabidopsis thaliana
NNTGACGTMA
TKACGTCANN		 PBM
Weirauch et al.(2014)
pTH8691 		0.787 0.941
TGA6
M01055_2.00 		Arabidopsis thaliana
NNVTGACGTMN
NKACGTCABNN		 PBM
Sullivan et al.(2014)
pTH8858 		0.787 0.941
TGA2
M01784_2.00 		Arabidopsis thaliana
NNACGTCABN
NVTGACGTNN		 PBM
Weirauch et al.(2014)
pTH8820 		0.787 0.941
TGA2
M00856_2.00 		Arabidopsis thaliana
NVTGACGTMN
NKACGTCABN		 PBM
Franco-Zorrilla et al.(2014)
TGA2 		0.787 0.941
TGA5
M01785_2.00 		Arabidopsis thaliana
VTGACGTN
NACGTCAB		 PBM
Weirauch et al.(2014)
pTH8180 		0.787 0.941
TGA2
M06785_2.00 		Arabidopsis thaliana
YNMCGYCABCD
HGVTGRCGKNR		 Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31 		0.787 0.941
TGA2
M06786_2.00 		Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH
DRTGACGTCAKCDNHNNNNN		 Dap-seq
OMalley et al.(2016)
TGA2_col 		0.787 0.941
TGA5
M06787_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA5_col_v3a 		0.787 0.941
TGA6
M06773_2.00 		Arabidopsis thaliana
DRTGACGTCAKCDNN
NNHGMTGACGTCAYH		 Dap-seq
OMalley et al.(2016)
TGA6_col_a 		0.787 0.941
TGA6
M06774_2.00 		Arabidopsis thaliana
NRTGACGTCAKCDNN
NNHGMTGACGTCAYN		 Dap-seq
OMalley et al.(2016)
TGA6_colamp_a 		0.787 0.941
TGA2
M09917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_01 		0.787 0.941
TGA2
M09918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA2_Q2 		0.787 0.941
PK09021.1
M01155_2.00 		Cannabis sativa
NNTGACGTMA
TKACGTCANN		 PBM
Lambert et al.(2019)
pTH10175 		0.787 0.922
HBP1B_WHEAT
M10043_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HBP1B_Q6 		0.787 0.922
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea01074.1.p bZIP 42 92

Links

Other bZIP family TFs
Other Panicum virgatum TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29216.m000249 Ricinus communis 29216.m000249 I 0.784
30131.m007163 Ricinus communis 30131.m007163 I 0.787
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.787
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.785
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.787
TGA6 Arabidopsis thaliana AT3G12250 D 0.787
TGA2 Arabidopsis thaliana AT5G06950 D 0.787
TGA5 Arabidopsis thaliana AT5G06960 D 0.787
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.787
Bo1g139470 Brassica oleracea Bo1g139470 I 0.787
Bo2g007460 Brassica oleracea Bo2g007460 I 0.787
Bo3g064830 Brassica oleracea Bo3g064830 I 0.787
Bo5g133550 Brassica oleracea Bo5g133550 I 0.787
Bo9g175710 Brassica oleracea Bo9g175710 I 0.787
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.787
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.787
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.787
Bra001443 Brassica rapa Bra001443 I 0.787
Bra009241 Brassica rapa Bra009241 I 0.787
Bra028713 Brassica rapa Bra028713 I 0.787
Bra034767 Brassica rapa Bra034767 I 0.787
Bra038705 Brassica rapa Bra038705 I 0.787
BRADI1G64060 Brachypodium distachyon BRADI1G64060 N 0.785
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.787
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.787
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.787
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.787
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.787
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.787
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.787
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.787
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.787
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.787
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.787
Ca_07170 Cicer arietinum Ca_07170 I 0.787
Ca_10901 Cicer arietinum Ca_10901 I 0.787
Ca_17971 Cicer arietinum Ca_17971 I 0.787
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.787
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.787
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.787
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.784
Cla002918 Citrullus lanatus Cla002918 I 0.787
Cla010092 Citrullus lanatus Cla010092 I 0.787
Cla017796 Citrullus lanatus Cla017796 I 0.784
Cla022393 Citrullus lanatus Cla022393 I 0.787
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.787
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.785
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.787
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.787
estExt_gwp_gw1.C_1260170 Physcomitrella patens estExt_gwp_gw1.C_1260170 N 0.785
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.787
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.787
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.787
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.787
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.787
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.787
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.784
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.787
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.787
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.784
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.787
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.787
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.787
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.787
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.787
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.787
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.785
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.784
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.784
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.787
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.787
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.787
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.787
Gorai.013G004400 Gossypium raimondii Gorai.013G004400 I 0.798
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.787
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.783
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.787
GRMZM2G056099 Zea mays GRMZM2G056099 N 0.785
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.783
GRMZM2G174284 Zea mays GRMZM2G174284 N 0.785
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.787
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.787
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.787
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.787
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.787
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.787
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.787
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.787
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.787
MDP0000262210 Malus domestica MDP0000262210 I 0.787
MDP0000300532 Malus domestica MDP0000300532 I 0.787
MDP0000307943 Malus domestica MDP0000307943 I 0.785
MDP0000320322 Malus domestica MDP0000320322 I 0.785
MDP0000320524 Malus domestica MDP0000320524 I 0.787
MDP0000536881 Malus domestica MDP0000536881 I 0.787
mgf003015m Mimulus guttatus mgf003015m I 0.790
mgf005858m Mimulus guttatus mgf005858m I 0.787
mgf016587m Mimulus guttatus mgf016587m N 0.787
mgf025345m Mimulus guttatus mgf025345m I 0.785
MLOC_64008 Hordeum vulgare MLOC_64008 N 0.785
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.787
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.787
OB01G21470 Oryza brachyantha OB01G21470 I 0.787
OB01G43330 Oryza brachyantha OB01G43330 I 0.783
OBART01G11380 Oryza barthii OBART01G11380 I 0.787
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.787
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.787
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.787
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.787
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.784
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.787
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.787
TGA2.3 Oryza sativa OS01G0279900 I 0.787
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.787
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.783
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.787
PK09021.1 Cannabis sativa PK09021.1 D 0.787
PK13754.1 Cannabis sativa PK13754.1 I 0.787
PK21698.1 Cannabis sativa PK21698.1 I 0.784
Pm016643 Prunus mume Pm016643 I 0.787
Pm025995 Prunus mume Pm025995 I 0.785
Pm028917 Prunus mume Pm028917 I 0.787
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.787
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.787
PAN Populus trichocarpa POPTR_0008s11710 I 0.787
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.787
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.785
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.787
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.787
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.787
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.787
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.785
Sb01g037050 Sorghum bicolor Sb01g037050 N 0.785
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.787
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.783
Si001292m.g Setaria italica Si001292m.g I 0.783
Si002195m.g Setaria italica Si002195m.g I 0.787
Si036527m.g Setaria italica Si036527m.g N 0.785
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.787
TCM_011845 Theobroma cacao TCM_011845 I 0.787
TCM_023491 Theobroma cacao TCM_023491 I 0.787
TCM_023492 Theobroma cacao TCM_023492 I 0.787
TCM_024862 Theobroma cacao TCM_024862 I 0.784
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.787
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.787
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.787
Traes_4AS_6EDD5ACF7 Triticum aestivum Traes_4AS_6EDD5ACF7 N 0.785
Traes_4BL_DAFEC95DD Triticum aestivum Traes_4BL_DAFEC95DD N 0.785
Traes_4DL_73DC40D7B Triticum aestivum Traes_4DL_73DC40D7B N 0.785
PAN Vitis vinifera VIT_01s0011g03230 I 0.787
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.787
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.784
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.787