Pavir.J05672 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J05672 T072452_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DPBF3
M01133_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Lambert et al.(2019)
pTH11531 		0.818 0.840
DPBF3
M01058_2.00 		Arabidopsis thaliana
HBACGTGKM
KMCACGTVD		 PBM
Sullivan et al.(2014)
pTH7219 		0.818 0.840
DPBF3
M01059_2.00 		Arabidopsis thaliana
NNMCACGTVN
NBACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7547 		0.818 0.840
DPBF3
M06777_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_colamp_a 		0.818 0.840
DPBF3
M06778_2.00 		Arabidopsis thaliana
TGMCACGTSWYMHHH
DDDKRWSACGTGKCA		 Dap-seq
OMalley et al.(2016)
AREB3_col_v31 		0.818 0.840
PK24978.1
M01162_2.00 		Cannabis sativa
NNNCACGTRTHNNNN
NNNNDAYACGTGNNN		 PBM
Lambert et al.(2019)
pTH10153 		0.786 0.720
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.784 0.680
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.784 0.680
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05672.1.p bZIP 295 346

Links

Other bZIP family TFs
Other Panicum virgatum TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.000
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.000
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.000
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.000
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.000
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.000
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.000
ASU_01199 Ascaris suum ASU_01199 I 0.000
ASU_04305 Ascaris suum ASU_04305 I 0.000
Bm2389 Brugia malayi Bm2389 I 0.000
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.000
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.000
BXY_0740200 Bursaphelenchus xylophilus BXY_0740200 N 0.000
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.000
CBG06052 Caenorhabditis briggsae CBG06052 I 0.000
CBG17744 Caenorhabditis briggsae CBG17744 I 0.000
CBG19594 Caenorhabditis briggsae CBG19594 I 0.000
CBG19604 Caenorhabditis briggsae CBG19604 I 0.000
CBN07936 Caenorhabditis brenneri CBN07936 I 0.000
CBN13729 Caenorhabditis brenneri CBN13729 I 0.000
CBN18797 Caenorhabditis brenneri CBN18797 I 0.000
CBN20828 Caenorhabditis brenneri CBN20828 I 0.000
CBN25890 Caenorhabditis brenneri CBN25890 N 0.000
CBN26258 Caenorhabditis brenneri CBN26258 I 0.000
CBN31048 Caenorhabditis brenneri CBN31048 I 0.000
CJA04720 Caenorhabditis japonica CJA04720 I 0.000
CJA08328 Caenorhabditis japonica CJA08328 I 0.000
CRE02711 Caenorhabditis remanei CRE02711 I 0.000
CRE06661 Caenorhabditis remanei CRE06661 I 0.000
CRE06667 Caenorhabditis remanei CRE06667 I 0.000
CRE10161 Caenorhabditis remanei CRE10161 I 0.000
CRE12779 Caenorhabditis remanei CRE12779 I 0.000
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.000
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.000
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.000
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.000
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I 0.000
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N 0.000
EVEC_0000793101 Enterobius vermicularis EVEC_0000793101 N 0.000
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.000
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.000
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.000
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.000
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.000
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.000
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.000
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.000
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.000
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.000
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.000
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.000
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.000
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.000
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.000
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.000
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.000
L889_g5777 Steinernema feltiae L889_g5777 I 0.000
L889_g6303 Steinernema feltiae L889_g6303 I 0.000
L889_g8361 Steinernema feltiae L889_g8361 I 0.000
L889_g8621 Steinernema feltiae L889_g8621 I 0.000
L892_g21738 Steinernema scapterisci L892_g21738 I 0.000
L893_g27196 Steinernema glaseri L893_g27196 I 0.000
L893_g27201 Steinernema glaseri L893_g27201 I 0.000
L893_g29388 Steinernema glaseri L893_g29388 I 0.000
L893_g32432 Steinernema glaseri L893_g32432 I 0.000
L893_g6878 Steinernema glaseri L893_g6878 I 0.000
L898_g10316 Steinernema monticolum L898_g10316 I 0.000
L898_g23965 Steinernema monticolum L898_g23965 I 0.000
L898_g24498 Steinernema monticolum L898_g24498 I 0.000
L898_g2799 Steinernema monticolum L898_g2799 I 0.000
LOAG_01074 Loa loa LOAG_01074 I 0.000
MhA1_Contig795.frz3.fgene1 Meloidogyne hapla MhA1_Contig795.frz3.fgene1 N 0.000
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.000
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.000
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.000
NBR_0001013301 Nippostrongylus brasiliensis NBR_0001013301 I 0.000
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.000
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.000
NECAME_12696 Necator americanus NECAME_12696 I 0.000
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.000
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.000
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.000
PEQ_0000199701 Parascaris equorum PEQ_0000199701 N 0.000
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.000
PPA21285 Pristionchus pacificus PPA21285 I 0.000
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.000
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.000
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.000
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.000
RSKR_0000811500 Rhabditophanes kr3021 RSKR_0000811500 I 0.000
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.000
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.000
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.000
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.000
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.000
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.000
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.000
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.000
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.000
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.000
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.000
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.000
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.000
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.000
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.000
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.000
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.000
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.000
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.000
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.000
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.000