CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CNN00550
(
Cryptococcus neoformans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CNN00550
T083908_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.821
0.870
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.796
0.848
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.782
0.783
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.782
0.783
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.782
0.783
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.782
0.783
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.782
0.783
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.782
0.783
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.782
0.783
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.782
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAW47215
C2H2 ZF
60
82
YKCPLCDRAFYRLEHQTRHIRTH
AAW47215
C2H2 ZF
88
112
HACTHPGCDKRFSRSDELTRHARIH
Links
Other
C2H2 ZF
family TFs
Other
Cryptococcus neoformans
TFs
288 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACHR008952
Anopheles christyi
ACHR008952
I
0.000
AEPI008594
Anopheles epiroticus
AEPI008594
I
0.000
AGAP000512
Anopheles gambiae
AGAP000512
I
0.000
Alligator_sinensis_CCG004256.1
Alligator sinensis
Alligator_sinensis_CCG004256.1
N
0.000
Alligator_sinensis_CCG011289.1
Alligator sinensis
Alligator_sinensis_CCG011289.1
I
0.000
Alligator_sinensis_CCG020461.1
Alligator sinensis
Alligator_sinensis_CCG020461.1
I
0.000
AMEM005509
Anopheles merus
AMEM005509
I
0.000
Aqu1.216869
Amphimedon queenslandica
Aqu1.216869
I
0.000
BGIBMGA001129
Bombyx mori
BGIBMGA001129
I
0.000
CBG02541
Caenorhabditis briggsae
CBG02541
I
0.000
CLEC025393
Cimex lectularius
CLEC025393
I
0.000
Cmyd_10014175
Chelonia mydas
Cmyd_10014175
I
0.000
CPIJ013490
Culex quinquefasciatus
CPIJ013490
I
0.000
CpipJ_CPIJ013490
Culex pipiens
CpipJ_CPIJ013490
I
0.000
D917_06432
Trichinella nativa
D917_06432
I
0.000
D918_02241
Trichuris suis
D918_02241
I
0.000
ECANG7_01760
Echinococcus canadensis
ECANG7_01760
I
0.000
EFV53558
Trichinella spiralis
EFV53558
I
0.000
ENSAMEG00000000632
Ailuropoda melanoleuca
ENSAMEG00000000632
I
0.000
ENSAMEG00000014183
Ailuropoda melanoleuca
ENSAMEG00000014183
I
0.000
ENSAMXG00000013086
Astyanax mexicanus
ENSAMXG00000013086
I
0.000
TEAD3
Canis familiaris
ENSCAFG00000001326
I
0.000
ENSCING00000019408
Ciona intestinalis
ENSCING00000019408
I
0.000
TEAD2
Callithrix jacchus
ENSCJAG00000000104
I
0.000
TEAD1
Callithrix jacchus
ENSCJAG00000010263
I
0.000
ENSCJAG00000018829
Callithrix jacchus
ENSCJAG00000018829
I
0.000
TEAD4
Callithrix jacchus
ENSCJAG00000023239
I
0.000
ENSCSAG00000002642
Chlorocebus sabaeus
ENSCSAG00000002642
I
0.000
ENSCSAVG00000007634
Ciona savignyi
ENSCSAVG00000007634
I
0.000
tead1a
Danio rerio
ENSDARG00000028159
I
0.000
tead1b
Danio rerio
ENSDARG00000059483
I
0.000
tead3b
Danio rerio
ENSDARG00000063649
I
0.000
TEAD4
Dasypus novemcinctus
ENSDNOG00000030589
I
0.000
ENSDORG00000004435
Dipodomys ordii
ENSDORG00000004435
I
0.000
Tead3
Dipodomys ordii
ENSDORG00000010798
I
0.000
TEAD1
Equus caballus
ENSECAG00000008332
I
0.000
TEAD4
Equus caballus
ENSECAG00000011303
I
0.000
TEAD3
Equus caballus
ENSECAG00000015056
I
0.000
TEAD2
Equus caballus
ENSECAG00000018010
I
0.000
TEAD2
Erinaceus europaeus
ENSEEUG00000012244
I
0.000
ENSFALG00000003635
Ficedula albicollis
ENSFALG00000003635
I
0.000
TEAD3
Felis catus
ENSFCAG00000012905
I
0.000
TEAD3
Homo sapiens
ENSG00000007866
D
0.000
TEAD2
Homo sapiens
ENSG00000074219
D
0.000
TEAD1
Homo sapiens
ENSG00000187079
D
0.000
TEAD4
Homo sapiens
ENSG00000197905
D
0.000
tead3a
Gasterosteus aculeatus
ENSGACG00000009758
I
0.000
tead1b
Gasterosteus aculeatus
ENSGACG00000015715
I
0.000
ENSGALG00000000953
Gallus gallus
ENSGALG00000000953
I
0.000
TEAD1
Gallus gallus
ENSGALG00000005415
I
0.000
TEAD3
Gorilla gorilla
ENSGGOG00000001847
I
0.000
TEAD2
Gorilla gorilla
ENSGGOG00000016367
I
0.000
ENSGMOG00000015271
Gadus morhua
ENSGMOG00000015271
I
0.000
ENSLACG00000013349
Latimeria chalumnae
ENSLACG00000013349
I
0.000
ENSLACG00000016444
Latimeria chalumnae
ENSLACG00000016444
I
0.000
TEAD4
Loxodonta africana
ENSLAFG00000006998
I
0.000
TEAD3
Loxodonta africana
ENSLAFG00000014818
I
0.000
TEAD2
Loxodonta africana
ENSLAFG00000016184
I
0.000
ENSLOCG00000004054
Lepisosteus oculatus
ENSLOCG00000004054
I
0.000
ENSLOCG00000009736
Lepisosteus oculatus
ENSLOCG00000009736
I
0.000
ENSLOCG00000016688
Lepisosteus oculatus
ENSLOCG00000016688
I
0.000
TEAD1
Meleagris gallopavo
ENSMGAG00000005493
I
0.000
TEAD4
Meleagris gallopavo
ENSMGAG00000013910
I
0.000
TEAD3
Microcebus murinus
ENSMICG00000000029
I
0.000
TEAD4
Microcebus murinus
ENSMICG00000000108
I
0.000
TEAD1
Microcebus murinus
ENSMICG00000007178
I
0.000
TEAD2
Macaca mulatta
ENSMMUG00000014791
I
0.000
TEAD3
Macaca mulatta
ENSMMUG00000015909
I
0.000
ENSMMUP00000031528
Macaca fascicularis
ENSMMUP00000031528
I
0.000
ENSMPUG00000003624
Mustela putorius furo
ENSMPUG00000003624
I
0.000
Tead3
Mus musculus
ENSMUSG00000002249
N
0.000
Tead4
Mus musculus
ENSMUSG00000030353
D
0.000
Tead2
Mus musculus
ENSMUSG00000030796
D
0.000
Tead1
Mus musculus
ENSMUSG00000055320
D
0.000
ENSNLEG00000005091
Nomascus leucogenys
ENSNLEG00000005091
I
0.000
ENSOARG00000010808
Ovis aries
ENSOARG00000010808
N
0.000
ENSOARG00000012126
Ovis aries
ENSOARG00000012126
I
0.000
TEAD3
Oryctolagus cuniculus
ENSOCUG00000004072
I
0.000
ENSOCUG00000015389
Oryctolagus cuniculus
ENSOCUG00000015389
I
0.000
TEAD3
Otolemur garnettii
ENSOGAG00000002943
I
0.000
TEAD4
Oryzias latipes
ENSORLG00000002553
I
0.000
tead3b
Oryzias latipes
ENSORLG00000006370
N
0.000
ENSP00000310701-D4
Bos grunniens
ENSP00000310701-D4
I
0.000
TEAD2
Procavia capensis
ENSPCAG00000003576
I
0.000
TEAD4
Procavia capensis
ENSPCAG00000013738
I
0.000
ENSPFOG00000003170
Poecilia formosa
ENSPFOG00000003170
I
0.000
ENSPFOG00000013997
Poecilia formosa
ENSPFOG00000013997
I
0.000
ENSPPYG00000010243
Pongo abelii
ENSPPYG00000010243
I
0.000
ENSPSIG00000006176
Pelodiscus sinensis
ENSPSIG00000006176
I
0.000
TEAD3
Pan troglodytes
ENSPTRG00000018086
I
0.000
TEAD3
Pteropus vampyrus
ENSPVAG00000002764
I
0.000
TEAD4
Pteropus vampyrus
ENSPVAG00000013230
I
0.000
Tead1
Rattus norvegicus
ENSRNOG00000015488
I
0.000
Tead2
Rattus norvegicus
ENSRNOG00000020695
I
0.000
ENSSHAG00000011218
Sarcophilus harrisii
ENSSHAG00000011218
I
0.000
ENSSHAG00000012780
Sarcophilus harrisii
ENSSHAG00000012780
I
0.000
ENSSHAG00000015930
Sarcophilus harrisii
ENSSHAG00000015930
I
0.000
TEAD4
Sus scrofa
ENSSSCG00000000736
I
0.000
TEAD2
Sus scrofa
ENSSSCG00000025568
I
0.000
ENSSTOG00000012695
Ictidomys tridecemlineatus
ENSSTOG00000012695
I
0.000
ENSSTOG00000024296
Ictidomys tridecemlineatus
ENSSTOG00000024296
I
0.000
TEAD3
Taeniopygia guttata
ENSTGUG00000001691
I
0.000
TEAD4
Tetraodon nigroviridis
ENSTNIG00000003414
N
0.000
tead1a
Tetraodon nigroviridis
ENSTNIG00000008857
I
0.000
tead3a
Tetraodon nigroviridis
ENSTNIG00000015031
I
0.000
tead1a
Takifugu rubripes
ENSTRUG00000005940
I
0.000
tead3a
Takifugu rubripes
ENSTRUG00000011546
I
0.000
TEAD4
Takifugu rubripes
ENSTRUG00000016489
I
0.000
tead3b
Takifugu rubripes
ENSTRUG00000018177
I
0.000
TEAD3
Tursiops truncatus
ENSTTRG00000009434
I
0.000
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
0.000
sd
Drosophila melanogaster
FBgn0003345
D
0.000
GA21152
Drosophila pseudoobscura
FBgn0081140
I
0.000
HelroG146479
Helobdella robusta
HelroG146479
I
0.000
L798_06691
Zootermopsis nevadensis
L798_06691
N
0.000
LCUP007338
Lucilia cuprina
LCUP007338
I
0.000
MDOA005382
Musca domestica
MDOA005382
I
0.000
Myotis_brandtii_TEAD2_10017641
Myotis brandtii
Myotis_brandtii_TEAD2_10017641
I
0.000
Myotis_brandtii_TEAD3_10017764
Myotis brandtii
Myotis_brandtii_TEAD3_10017764
I
0.000
NEMVEDRAFT_v1g86806
Nematostella vectensis
NEMVEDRAFT_v1g86806
I
0.000
nRc.2.0.1.g07693
Romanomermis culicivorax
nRc.2.0.1.g07693
I
0.000
Ogr18322
Ophisaurus gracilis
Ogr18322
I
0.000
PPAI001408
Phlebotomus papatasi
PPAI001408
I
0.000
Pvit_04865
Pogona vitticeps
Pvit_04865
I
0.000
Pvit_05988
Pogona vitticeps
Pvit_05988
I
0.000
SMAR011013
Strigamia maritima
SMAR011013
I
0.000
SMAR013465
Strigamia maritima
SMAR013465
I
0.000
TsM_000210300
Taenia solium
TsM_000210300
I
0.000
egl-44
Caenorhabditis elegans
WBGene00001208
I
0.000