CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF558
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000030929
T088032_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.820
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000041316
C2H2 ZF
155
176
ECNQCFKVFSTKSNLTQHKRIH
ENSBTAP00000041316
C2H2 ZF
182
204
YDCNQCGKSFSSRSYLTIHKRIH
ENSBTAP00000041316
C2H2 ZF
210
232
YECNDCGKAFNDPSSLRLHVRIH
ENSBTAP00000041316
C2H2 ZF
238
260
YECNQCFHVFRTSCNLKSHKRIH
ENSBTAP00000041316
C2H2 ZF
266
288
HECNQCGKAFSTRSSLTGHNSIH
ENSBTAP00000041316
C2H2 ZF
294
316
YECNDCGKTFRKSSYLTQHMRTH
ENSBTAP00000041316
C2H2 ZF
322
344
YECNQCGKSFSSSFSLTVHKRIH
ENSBTAP00000041316
C2H2 ZF
350
372
YECSNCGKAFNNLSAVKKHVRTH
ENSBTAP00000041316
C2H2 ZF
378
400
YECNHCGKSFTTNSYLSVHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000008173
Ailuropoda melanoleuca
ENSAMEG00000008173
I
0.826
ZNF558
Canis familiaris
ENSCAFG00000030395
I
0.825
ZNF558
Callithrix jacchus
ENSCJAG00000011049
I
0.820
ZNF558
Cavia porcellus
ENSCPOG00000009453
I
0.819
ENSCSAG00000007844
Chlorocebus sabaeus
ENSCSAG00000007844
I
0.822
ZNF558
Equus caballus
ENSECAG00000012836
I
0.826
ZNF558
Homo sapiens
ENSG00000167785
D
0.820
ZNF558
Gorilla gorilla
ENSGGOG00000006642
I
0.820
ZNF557
Macaca mulatta
ENSMMUG00000019966
I
0.822
ENSMPUG00000008460
Mustela putorius furo
ENSMPUG00000008460
I
0.825
Zfp558
Mus musculus
ENSMUSG00000074500
I
0.785
ENSNLEG00000011956
Nomascus leucogenys
ENSNLEG00000011956
I
0.822
ZNF558
Otolemur garnettii
ENSOGAG00000008204
I
0.822
ENSP00000404065-D15
Bos grunniens
ENSP00000404065-D15
I
0.827
ENSP00000410703
Macaca fascicularis
ENSP00000410703
I
0.822
ENSPANG00000011044
Papio anubis
ENSPANG00000011044
I
0.822
ENSPPYG00000009513
Pongo abelii
ENSPPYG00000009513
I
0.822
ZNF558
Pan troglodytes
ENSPTRG00000010432
I
0.820
ZNF558
Pteropus vampyrus
ENSPVAG00000001544
I
0.819
ZNF558
Sus scrofa
ENSSSCG00000029035
I
0.827
ENSSTOG00000002432
Ictidomys tridecemlineatus
ENSSTOG00000002432
I
0.822
ENSTSYG00000001297
Tarsius syrichta
ENSTSYG00000001297
I
0.762
ZNF558
Tursiops truncatus
ENSTTRG00000014447
I
0.821
ZNF558
Vicugna pacos
ENSVPAG00000010290
I
0.825