ZNF544 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000000329 T089180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN22
M08361_2.00 		Homo sapiens
BNGCCTCCKCCVTCDSNC
GNSHGABGGMGGAGGCNV		 ChIP-seq
Schmitges et al.(2016)
P10073_1-6.RCADE 		0.823 0.984
ZNF8
M08401_2.00 		Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN		 ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE 		0.827 1.000
ZNF274
M04549_2.00 		Homo sapiens
NVYGAGRACTCAYRYN
NRYRTGAGTYCTCRBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_HT-SELEX 		0.827 1.000
ZSCAN22
M08261_2.00 		Homo sapiens
CCTCCKCCMTCWGAC
GTCWGAKGGMGGAGG		 ChIP-seq
Najafabadi et al.(2015b)
ZSCAN22 		0.823 0.984
ZNF8
M07781_2.00 		Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping 		0.827 1.000
ZNF274
M07632_2.00 		Homo sapiens
CWGTRTGARTTCTCW
WGAGAAYTCAYACWG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF274.RCADE.ReprocessedData 		0.827 1.000
ZSCAN22
M08935_2.00 		Homo sapiens
CCKCCKCCMTCDSNYH
DRNSHGAKGGMGGMGG		 Misc
Kulakovskiy et al.(2013)
ZSC22_HUMAN.H11MO.0.C 		0.823 0.984
ZNF8
M08961_2.00 		Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA		 Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C 		0.827 1.000
ZNF274
M07933_2.00 		Homo sapiens
YTTCTCHCCAGTRTGAR
YTCAYACTGGDGAGAAR		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ZNF274_UCD 		0.827 1.000
ZNF274
M07934_2.00 		Homo sapiens
GGTTTYTCTCCAGTR
YACTGGAGARAAACC		 ChIP-seq
Gerstein et al.(2012)
HepG2b_ZNF274_UCD 		0.827 1.000
ZNF274
M07935_2.00 		Homo sapiens
GAGAAYTCAYACTGG
CCAGTRTGARTTCTC		 ChIP-seq
Gerstein et al.(2012)
K562b_ZNF274_UCD 		0.827 1.000
ZNF274
M07936_2.00 		Homo sapiens
TTYTCTCCAGTRTGA
TCAYACTGGAGARAA		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_ZNF274_UCD 		0.827 1.000
ZNF274
M08916_2.00 		Homo sapiens
TWNGRTTTCTYTCCAKTRTG
CAYAMTGGARAGAAAYCNWA		 Misc
Kulakovskiy et al.(2013)
ZN274_HUMAN.H11MO.0.A 		0.827 1.000
ZNF274
M04550_2.00 		Homo sapiens
NVHGAGRACTCAYRYN
NRYRTGAGTYCTCDBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000000546 C2H2 ZF 270 292
ENSCJAP00000000546 C2H2 ZF 298 320
ENSCJAP00000000546 C2H2 ZF 326 348
ENSCJAP00000000546 C2H2 ZF 354 376
ENSCJAP00000000546 C2H2 ZF 382 404
ENSCJAP00000000546 C2H2 ZF 410 432
ENSCJAP00000000546 C2H2 ZF 438 460
ENSCJAP00000000546 C2H2 ZF 466 488
ENSCJAP00000000548 C2H2 ZF 270 292
ENSCJAP00000000548 C2H2 ZF 298 320
ENSCJAP00000000548 C2H2 ZF 326 348
ENSCJAP00000000548 C2H2 ZF 354 376
ENSCJAP00000000548 C2H2 ZF 382 404
ENSCJAP00000000548 C2H2 ZF 410 432
ENSCJAP00000000548 C2H2 ZF 438 460
ENSCJAP00000000548 C2H2 ZF 466 488
ENSCJAP00000000556 C2H2 ZF 257 279
ENSCJAP00000000556 C2H2 ZF 285 307
ENSCJAP00000000556 C2H2 ZF 313 335
ENSCJAP00000000556 C2H2 ZF 341 363
ENSCJAP00000000556 C2H2 ZF 369 391
ENSCJAP00000000556 C2H2 ZF 397 419
ENSCJAP00000000558 C2H2 ZF 366 388
ENSCJAP00000000558 C2H2 ZF 394 416
ENSCJAP00000000558 C2H2 ZF 422 444
ENSCJAP00000000558 C2H2 ZF 453 471
ENSCJAP00000000558 C2H2 ZF 478 500
ENSCJAP00000000558 C2H2 ZF 506 528
ENSCJAP00000000558 C2H2 ZF 534 556
ENSCJAP00000000558 C2H2 ZF 562 584
ENSCJAP00000000558 C2H2 ZF 590 612
ENSCJAP00000000558 C2H2 ZF 618 640
ENSCJAP00000000558 C2H2 ZF 646 668
ENSCJAP00000000558 C2H2 ZF 674 696
ENSCJAP00000000576 C2H2 ZF 506 528
ENSCJAP00000000576 C2H2 ZF 534 556
ENSCJAP00000000576 C2H2 ZF 562 584
ENSCJAP00000000576 C2H2 ZF 590 612
ENSCJAP00000000576 C2H2 ZF 618 640
ENSCJAP00000046364 C2H2 ZF 1 22
ENSCJAP00000046364 C2H2 ZF 28 50
ENSCJAP00000046364 C2H2 ZF 56 78
ENSCJAP00000046364 C2H2 ZF 84 106
ENSCJAP00000046364 C2H2 ZF 112 134

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00110p00030150 Amborella trichopoda AMTR_s00110p00030150 I
BGIOSGA017139 Oryza indica BGIOSGA017139 N
Bra000283 Brassica rapa Bra000283 I
BRADI5G21950 Brachypodium distachyon BRADI5G21950 N
Cla018863 Citrullus lanatus Cla018863 I
Cucsa.113040 Cucumis sativus Cucsa.113040 I
estExt_fgenesh1_pg.C_680048 Physcomitrella patens estExt_fgenesh1_pg.C_680048 I
estExt_fgenesh1_pg.C_690022 Physcomitrella patens estExt_fgenesh1_pg.C_690022 I
e_gw1.84.236.1 Physcomitrella patens e_gw1.84.236.1 I
F775_31091 Aegilops tauschii F775_31091 N
GLYMA02G45150 Glycine max GLYMA02G45150 I
GLYMA14G03600 Glycine max GLYMA14G03600 I
GRMZM2G042920 Zea mays GRMZM2G042920 N
GRMZM2G080054 Zea mays GRMZM2G080054 N
gw1.147.92.1 Physcomitrella patens gw1.147.92.1 I
Lus10020727.g Linum usitatissimum Lus10020727.g I
Lus10029805.g Linum usitatissimum Lus10029805.g I
MLOC_36345 Hordeum vulgare MLOC_36345 N
OBART04G25920 Oryza barthii OBART04G25920 N
OGLUM04G25420 Oryza glumaepatula OGLUM04G25420 N
OMERI04G21140 Oryza meridionalis OMERI04G21140 N
ONIVA04G24530 Oryza nivara ONIVA04G24530 N
OPUNC04G23010 Oryza punctata OPUNC04G23010 N
ORGLA04G0225800 Oryza glaberrima ORGLA04G0225800 N
ORUFI04G27110 Oryza rufipogon ORUFI04G27110 N
OS04G0618600 Oryza sativa OS04G0618600 N
Pavir.Gb00491 Panicum virgatum Pavir.Gb00491 N
Pavir.J18207 Panicum virgatum Pavir.J18207 N
Sb06g028750 Sorghum bicolor Sb06g028750 N
SELMODRAFT_114141 Selaginella moellendorffii SELMODRAFT_114141 I
SELMODRAFT_116654 Selaginella moellendorffii SELMODRAFT_116654 I
SELMODRAFT_118904 Selaginella moellendorffii SELMODRAFT_118904 I
SELMODRAFT_29179 Selaginella moellendorffii SELMODRAFT_29179 I
SELMODRAFT_39143 Selaginella moellendorffii SELMODRAFT_39143 I
Si011759m.g Setaria italica Si011759m.g N
Traes_2AL_67BC3AFBE Triticum aestivum Traes_2AL_67BC3AFBE N
Traes_2BL_A1F9C66CA Triticum aestivum Traes_2BL_A1F9C66CA N
Traes_2DL_0B1444B68 Triticum aestivum Traes_2DL_0B1444B68 N
Traes_2DL_46C827FAC Triticum aestivum Traes_2DL_46C827FAC N
Traes_2DL_46C827FAC1 Triticum aestivum Traes_2DL_46C827FAC1 N
TRIUR3_18209 Triticum urartu TRIUR3_18209 N