GLI1 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000007324 T089352_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013656 C2H2 ZF 108 132
ENSCJAP00000013656 C2H2 ZF 140 167
ENSCJAP00000013656 C2H2 ZF 173 197
ENSCJAP00000013656 C2H2 ZF 203 228
ENSCJAP00000013656 C2H2 ZF 234 259
ENSCJAP00000013686 C2H2 ZF 236 260
ENSCJAP00000013686 C2H2 ZF 268 295
ENSCJAP00000013686 C2H2 ZF 301 325
ENSCJAP00000013686 C2H2 ZF 331 356
ENSCJAP00000013686 C2H2 ZF 362 387
ENSCJAP00000024516 C2H2 ZF 108 132
ENSCJAP00000024516 C2H2 ZF 140 167
ENSCJAP00000024516 C2H2 ZF 173 197
ENSCJAP00000024516 C2H2 ZF 203 228
ENSCJAP00000024516 C2H2 ZF 234 259
ENSCJAP00000046605 C2H2 ZF 195 219
ENSCJAP00000046605 C2H2 ZF 227 254
ENSCJAP00000046605 C2H2 ZF 260 284
ENSCJAP00000046605 C2H2 ZF 290 315
ENSCJAP00000046605 C2H2 ZF 321 346

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011380 Aedes aegypti AAEL011380 N 0.000
AAH44009 Xenopus laevis AAH44009 N 0.000
AAI68534 Xenopus tropicalis AAI68534 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.000
AARA010318 Anopheles arabiensis AARA010318 N 0.000
AATE018776 Anopheles atroparvus AATE018776 N 0.000
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.000
ACEP16613 Atta cephalotes ACEP16613 N 0.000
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.000
ACUA021022 Anopheles culicifacies ACUA021022 N 0.000
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.000
ADAC001494 Anopheles darlingi ADAC001494 N 0.000
ADIR011701 Anopheles dirus ADIR011701 N 0.000
AEPI002924 Anopheles epiroticus AEPI002924 N 0.000
AFAF003948 Anopheles farauti AFAF003948 N 0.000
AFUN010134 Anopheles funestus AFUN010134 N 0.000
AGAP000005 Anopheles gambiae AGAP000005 N 0.000
AMAM015540 Anopheles maculatus AMAM015540 N 0.000
AMEC021909 Anopheles melas AMEC021909 N 0.000
AMEM017336 Anopheles merus AMEM017336 N 0.000
AMIN005344 Anopheles minimus AMIN005344 N 0.000
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.000
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.000
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.000
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.000
ASIS000124 Anopheles sinensis ASIS000124 N 0.000
ASU_03902 Ascaris suum ASU_03902 N 0.000
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.000
BAA06440 Xenopus laevis BAA06440 N 0.000
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.000
Bm4180 Brugia malayi Bm4180 N 0.000
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.000
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N 0.000
CapteG158220 Capitella teleta CapteG158220 N 0.000
CBG17468 Caenorhabditis briggsae CBG17468 N 0.000
CBN17977 Caenorhabditis brenneri CBN17977 N 0.000
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.000
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.000
CJA09678 Caenorhabditis japonica CJA09678 N 0.000
CJA42049 Caenorhabditis japonica CJA42049 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.000
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.000
CRE02943 Caenorhabditis remanei CRE02943 N 0.000
csin110255 Clonorchis sinensis csin110255 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
D917_01254 Trichinella nativa D917_01254 N 0.000
D917_08189 Trichinella nativa D917_08189 N 0.000
D918_07195 Trichuris suis D918_07195 N 0.000
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.000
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.000
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.000
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.000
EFV53345 Trichinella spiralis EFV53345 N 0.000
EFV57410 Trichinella spiralis EFV57410 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.000
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N 0.000
HMGB1 Bos taurus ENSBTAG00000014862 N 0.000
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.000
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N 0.000
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.000
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.000
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.000
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.000
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.000
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.000
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.000
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
hmgb1a Danio rerio ENSDARG00000099175 N 0.000
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.000
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.000
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.000
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.000
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.000
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.000
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.000
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.000
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.000
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.000
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.000
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.000
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.000
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.000
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.000
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.000
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.000
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.000
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.000
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.000
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.000
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.000
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.000
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.000
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.000
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.000
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.000
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.000
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.000
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.000
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.000
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.000
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.000
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.000
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.000
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.000
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.000
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.000
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.000
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.000
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.000
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.000
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.000
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.000
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.000
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.000
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.000
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.000
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N 0.000
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.000
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.000
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.000
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.000
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.000
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.000
Dsp1 Drosophila melanogaster FBgn0011764 N 0.000
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.000
GF19115 Drosophila ananassae FBgn0096126 N 0.000
GG17955 Drosophila erecta FBgn0110175 N 0.000
GD17278 Drosophila simulans FBgn0188840 N 0.000
GE17263 Drosophila yakuba FBgn0234741 N 0.000
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.000
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.000
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.000
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.000
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HelroG157726 Helobdella robusta HelroG157726 N 0.000
HelroG157878 Helobdella robusta HelroG157878 N 0.000
HelroG87827 Helobdella robusta HelroG87827 N 0.000
HMEL007340 Heliconius melpomene HMEL007340 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.000
ISCW017350 Ixodes scapularis ISCW017350 N 0.000
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.000
L889_g13533 Steinernema feltiae L889_g13533 N 0.000
L892_g17551 Steinernema scapterisci L892_g17551 N 0.000
L893_g5947 Steinernema glaseri L893_g5947 N 0.000
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.000
LOAG_04936 Loa loa LOAG_04936 N 0.000
LotgiG200052 Lottia gigantea LotgiG200052 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
MDOA008812 Musca domestica MDOA008812 N 0.000
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.000
Minc01077 Meloidogyne incognita Minc01077 N 0.000
Minc03268 Meloidogyne incognita Minc03268 N 0.000
Minc08988 Meloidogyne incognita Minc08988 N 0.000
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.000
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.000
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.000
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.000
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.000
NECAME_09126 Necator americanus NECAME_09126 N 0.000
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.000
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.000
NV15664 Nasonia vitripennis NV15664 N 0.000
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.000
PHUM006290 Pediculus humanus PHUM006290 N 0.000
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.000
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.000
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
SINV22586 Solenopsis invicta SINV22586 N 0.000
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.000
SMAR013695 Strigamia maritima SMAR013695 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.000
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.000
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.000
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.000
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.000
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.000
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.000
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.000
T265_10726 Opisthorchis viverrini T265_10726 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
T265_14643 Opisthorchis viverrini T265_14643 N 0.000
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.000
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.000
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.000
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.000
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.000
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.000
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.000
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.000
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.000
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.000
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.000