sp8a (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000011870 T090828_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.811 0.986
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.811 0.986
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.811 0.986
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.811 0.971
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.811 0.971
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.798 0.971
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.798 0.971
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.798 0.971
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.778 0.913
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.778 0.913
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.771 0.855
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.771 0.855
Sp7
M09009_2.00 		Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB		 Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A 		0.764 0.855
SP7
M10258_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSX_Q3 		0.764 0.855
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.762 0.899
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.762 0.899
SP4
M02879_2.00 		Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN		 SELEX
Jolma et al.(2013)
SP4_1 		0.762 0.899
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.762 0.899
SP4
M08296_2.00 		Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN		 ChIP-seq
Schmitges et al.(2016)
Q02446.MEME 		0.762 0.899
SP4
M08873_2.00 		Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A 		0.762 0.899
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.762 0.899
SP4
M10165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q3 		0.762 0.899
SP4
M10166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q5 		0.762 0.899
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.761 0.870
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.761 0.870
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.761 0.870
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.761 0.870
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.761 0.870
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.761 0.870
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.758 0.870
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.758 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000008476 C2H2 ZF 280 304
ENSDARP00000008476 C2H2 ZF 310 334
ENSDARP00000008476 C2H2 ZF 340 362

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

558 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017363.1 Alligator sinensis Alligator_sinensis_CCG017363.1 I 0.000
Cmyd_10014303 Chelonia mydas Cmyd_10014303 I 0.000
ENSAMEG00000019562 Ailuropoda melanoleuca ENSAMEG00000019562 I 0.000
ENSAMXG00000026471 Astyanax mexicanus ENSAMXG00000026471 I 0.000
POU3F4 Bos taurus ENSBTAG00000015712 I 0.000
POU3F4 Canis familiaris ENSCAFG00000017368 I 0.000
POU3F4 Choloepus hoffmanni ENSCHOG00000002799 I 0.000
POU3F4 Callithrix jacchus ENSCJAG00000002526 I 0.000
ENSCSAG00000000074 Chlorocebus sabaeus ENSCSAG00000000074 I 0.000
POU3F4 Dasypus novemcinctus ENSDNOG00000004912 I 0.000
Pou3f4 Dipodomys ordii ENSDORG00000006273 I 0.000
POU3F4 Equus caballus ENSECAG00000002519 I 0.000
POU3F4 Felis catus ENSFCAG00000011964 I 0.000
POU3F4 Homo sapiens ENSG00000196767 D 0.000
POU3F4 Loxodonta africana ENSLAFG00000015688 I 0.000
ENSLOCG00000017491 Lepisosteus oculatus ENSLOCG00000017491 I 0.000
POU3F4 Microcebus murinus ENSMICG00000017301 I 0.000
POU3F4 Myotis lucifugus ENSMLUG00000004140 I 0.000
POU3F4 Macaca mulatta ENSMMUG00000003112 I 0.000
POU3F4 Monodelphis domestica ENSMODG00000014279 I 0.000
ENSMPUG00000020194 Mustela putorius furo ENSMPUG00000020194 I 0.000
Pou3f4 Mus musculus ENSMUSG00000056854 D 0.000
ENSOANG00000002241 Ornithorhynchus anatinus ENSOANG00000002241 I 0.000
ENSOARG00000006191 Ovis aries ENSOARG00000006191 I 0.000
POU3F4 Oryctolagus cuniculus ENSOCUG00000010927 I 0.000
POU3F4 Otolemur garnettii ENSOGAG00000002820 I 0.000
ENSP00000362296 Macaca fascicularis ENSP00000362296 I 0.000
ENSP00000362296-D1 Bos grunniens ENSP00000362296-D1 I 0.000
ENSPANG00000019402 Papio anubis ENSPANG00000019402 I 0.000
ENSPPYG00000020510 Pongo abelii ENSPPYG00000020510 I 0.000
ENSPSIG00000000094 Pelodiscus sinensis ENSPSIG00000000094 I 0.000
POU3F4 Pan troglodytes ENSPTRG00000040705 I 0.000
POU3F4 Pteropus vampyrus ENSPVAG00000001305 I 0.000
Pou3f4 Rattus norvegicus ENSRNOG00000002784 I 0.000
POU3F4 Sus scrofa ENSSSCG00000012454 I 0.000
ENSSTOG00000026467 Ictidomys tridecemlineatus ENSSTOG00000026467 I 0.000
POU3F4 Vicugna pacos ENSVPAG00000010779 I 0.000
Myotis_brandtii_POU3F4_10020378 Myotis brandtii Myotis_brandtii_POU3F4_10020378 I 0.000
Pvit_02954 Pogona vitticeps Pvit_02954 I 0.000