snai2 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000040046 T090907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.803 0.939
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.803 0.939
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.803 0.939
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.803 0.939
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.803 0.939
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.803 0.939
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.803 0.939
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.803 0.939
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.803 0.939
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.803 0.939
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.803 0.939
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.803 0.939
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.799 0.930
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.757 0.781
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.757 0.781
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.757 0.781
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.757 0.781
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000058570 C2H2 ZF 117 139
ENSDARP00000058570 C2H2 ZF 148 170
ENSDARP00000058570 C2H2 ZF 174 196
ENSDARP00000058570 C2H2 ZF 202 224
ENSDARP00000058570 C2H2 ZF 230 251

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03477 Capronia coronata A1O1_03477 N
AB02376.1 Alternaria brassicicola AB02376.1 N
AUEXF2481DRAFT_43258 Aureobasidium subglaciale AUEXF2481DRAFT_43258 N
BAUCODRAFT_76471 Baudoinia compniacensis BAUCODRAFT_76471 N
BBA_08712 Beauveria bassiana BBA_08712 N
Bcin15g03690 Botrytis cinerea Bcin15g03690 N
ANIA_07050 Aspergillus nidulans CADANIAG00000421 N
ATEG_02243 Aspergillus terreus CADATEAG00000116 N
CFIO01_10413 Colletotrichum fioriniae CFIO01_10413 N
CIMG_08688 Coccidioides immitis CIMG_08688 N
COCC4DRAFT_48711 Bipolaris maydis COCC4DRAFT_48711 N
COCCADRAFT_28209 Bipolaris zeicola COCCADRAFT_28209 N
COCMIDRAFT_98604 Bipolaris oryzae COCMIDRAFT_98604 N
COCSADRAFT_191370 Bipolaris sorokiniana COCSADRAFT_191370 N
COCVIDRAFT_38655 Bipolaris victoriae COCVIDRAFT_38655 N
CPC735_062800 Coccidioides posadasii CPC735_062800 N
DOTSEDRAFT_71663 Dothistroma septosporum DOTSEDRAFT_71663 N
EPUS_03180 Endocarpon pusillum EPUS_03180 N
estExt_Genewise1.C_32092 Cryphonectria parasitica estExt_Genewise1.C_32092 N
estExt_Genewise1Plus.C_30389 Neurospora discreta estExt_Genewise1Plus.C_30389 N
estExt_Genewise1Plus.C_590020 Mycosphaerella fijiensis estExt_Genewise1Plus.C_590020 N
estExt_Genewise1Plus.C_sca_82_chr10_2_00666 Nectria haematococca estExt_Genewise1Plus.C_sca_82_chr10_2_00666 N
EURHEDRAFT_416477 Aspergillus ruber EURHEDRAFT_416477 N
EV44_g4401 Erysiphe necator EV44_g4401 N
e_gw1.3.1055.1 Cochliobolus heterostrophus C5 e_gw1.3.1055.1 N
fgenesh1_pg.C_chr_4000614 Mycosphaerella graminicola fgenesh1_pg.C_chr_4000614 N
fgenesh1_pm.00795_#_71 Aspergillus carbonarius fgenesh1_pm.00795_#_71 N
FGRRES_01936 Fusarium graminearum FGRRES_01936 N
FOXG_04196 Fusarium oxysporum FOXG_04196 N
GGTG_08792 Gaeumannomyces graminis GGTG_08792 N
H102_02999 Trichophyton rubrum H102_02999 N
H105_03019 Trichophyton soudanense H105_03019 N
HMPREF1120_07037 Exophiala dermatitidis HMPREF1120_07037 N
KLTH0E08778g Kluyveromyces thermotolerans KLTH0E08778g N
KLTH0E08778g Lachancea thermotolerans KLTH0E08778g N
KUCA_T00003965001 Kuraishia capsulata KUCA_T00003965001 N
Kwal_17681 Kluyveromyces waltii Kwal_17681 N
M437DRAFT_75522 Aureobasidium melanogenum M437DRAFT_75522 N
M438DRAFT_357635 Aureobasidium pullulans M438DRAFT_357635 N
MAPG_05005 Magnaporthe poae MAPG_05005 N
MGG_01836 Magnaporthe oryzae MGG_01836 N
MYCFIDRAFT_61348 Pseudocercospora fijiensis MYCFIDRAFT_61348 N
Mycgr3G92834 Zymoseptoria tritici Mycgr3G92834 N
MYCTH_2298696 Myceliophthora thermophila MYCTH_2298696 N
NCU08000 Neurospora crassa NCU08000 N
NechaG72345 Fusarium solani NechaG72345 N
PAAG_08396 Paracoccidioides sp lutzii PAAG_08396 N
PABG_07803 Paracoccidioides brasiliensis PABG_07803 N
PDE_04503 Penicillium oxalicum PDE_04503 N
PV04_05931 Capronia semiimmersa PV04_05931 N
PV05_04616 Exophiala xenobiotica PV05_04616 N
PV06_01443 Exophiala oligosperma PV06_01443 N
PV07_04335 Cladophialophora immunda PV07_04335 N
PV08_00049 Exophiala spinifera PV08_00049 N
PV09_03090 Verruconis gallopava PV09_03090 N
PV10_07497 Exophiala mesophila PV10_07497 N
PV11_00147 Exophiala sideris PV11_00147 N
SEPMUDRAFT_148866 Sphaerulina musiva SEPMUDRAFT_148866 N
SNOG_12765 Stagonospora nodorum SNOG_12765 N
THITE_2115093 Thielavia terrestris THITE_2115093 N
TRIATDRAFT_238142 Trichoderma atroviride TRIATDRAFT_238142 N
TRIREDRAFT_52841 Trichoderma reesei TRIREDRAFT_52841 N
TRIVIDRAFT_223962 Trichoderma virens TRIVIDRAFT_223962 N
UREG_02672 Uncinocarpus reesii UREG_02672 N
V499_05441 Pseudogymnoascus pannorum V499_05441 N
VHEMI00485 Torrubiella hemipterigena VHEMI00485 N
YALI0_D12628g Yarrowia lipolytica YALI0_D12628g N
Z518_08246 Rhinocladiella mackenziei Z518_08246 N
Z519_07768 Cladophialophora bantiana Z519_07768 N