glis1a (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000068580 T090999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.788 0.886
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.788 0.886
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.788 0.886
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.788 0.886
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000124282 C2H2 ZF 127 152
ENSDARP00000124282 C2H2 ZF 161 188
ENSDARP00000124282 C2H2 ZF 195 218
ENSDARP00000124282 C2H2 ZF 224 248
ENSDARP00000124282 C2H2 ZF 254 278

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004381 Calypte anna Aan_R004381 I 0.788
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.788
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.788
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.790
ENSAMXG00000019181 Astyanax mexicanus ENSAMXG00000019181 I 0.758
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.788
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.788
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.788
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.788
GLIS1 Cavia porcellus ENSCPOG00000009497 I 0.790
glis1b Danio rerio ENSDARG00000027933 I 0.790
GLIS3 Equus caballus ENSECAG00000020544 I 0.788
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.788
ENSFALG00000010519 Ficedula albicollis ENSFALG00000010519 I 0.797
GLIS3 Homo sapiens ENSG00000107249 D 0.788
GLIS1 Gasterosteus aculeatus ENSGACG00000012109 I 0.790
GLIS3 Gallus gallus ENSGALG00000010180 I 0.788
ENSGMOG00000018511 Gadus morhua ENSGMOG00000018511 I 0.790
ENSLOCG00000003071 Lepisosteus oculatus ENSLOCG00000003071 I 0.790
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.788
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.788
ENSMEUG00000009882 Macropus eugenii ENSMEUG00000009882 I 0.790
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.788
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.788
Glis3 Mus musculus ENSMUSG00000052942 I 0.788
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.788
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.788
ENSOARG00000013378 Ovis aries ENSOARG00000013378 I 0.788
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.788
ENSONIG00000014033 Oreochromis niloticus ENSONIG00000014033 I 0.784
ENSORLG00000003872 Oryzias latipes ENSORLG00000003872 I 0.790
ENSORLG00000007755 Oryzias latipes ENSORLG00000007755 I 0.785
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.788
ENSP00000384734-D2 Bos grunniens ENSP00000384734-D2 I 0.788
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.788
GLIS3 Procavia capensis ENSPCAG00000004139 I 0.779
ENSPFOG00000002618 Poecilia formosa ENSPFOG00000002618 I 0.790
ENSPFOG00000017914 Poecilia formosa ENSPFOG00000017914 I 0.790
ENSPFOG00000019805 Poecilia formosa ENSPFOG00000019805 I 0.786
ENSPPYG00000019250 Pongo abelii ENSPPYG00000019250 I 0.779
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.788
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.788
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.788
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.788
GLIS3 Taeniopygia guttata ENSTGUG00000005266 I 0.785
GLIS1 Tetraodon nigroviridis ENSTNIG00000010694 I 0.790
ENSTRUG00000001198 Takifugu rubripes ENSTRUG00000001198 I 0.790
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.788
GLIS3 Vicugna pacos ENSVPAG00000005473 I 0.788
ENSXMAG00000005013 Xiphophorus maculatus ENSXMAG00000005013 I 0.786
ENSXMAG00000005337 Xiphophorus maculatus ENSXMAG00000005337 I 0.790
ENSXMAG00000013077 Xiphophorus maculatus ENSXMAG00000013077 I 0.790
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.782
Gfo_R012286 Geospiza fortis Gfo_R012286 I 0.772
gw.28.157.1 Branchiostoma floridae gw.28.157.1 I 0.782
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.788
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.788
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.788
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.784
SMAR005079 Strigamia maritima SMAR005079 I 0.763
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.782
glis3 Xenopus tropicalis XB-GENE-984727 I 0.778