CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGALG00000015241
(
Gallus gallus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGALG00000015241
T095951_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SNAI2
M00221_2.00
Homo sapiens
HACYTGH
DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.825
0.991
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN
NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.825
0.991
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY
RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.825
0.991
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY
RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.825
0.991
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY
RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.825
0.991
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY
RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.825
0.991
SNAI2
M10102_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.825
0.991
SNAI2
M10103_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.825
0.991
SNAI2
M10104_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.825
0.991
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY
RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.825
0.991
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.825
0.991
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.825
0.991
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN
NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.821
0.982
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.767
0.816
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000024548
C2H2 ZF
128
150
FQCGLCNKTYSTFSGLAKHKQLH
ENSGALP00000024548
C2H2 ZF
159
181
FSCKYCDKEYVSLGALKMHIRTH
ENSGALP00000024548
C2H2 ZF
185
207
CVCKICGKAFSRPWLLQGHIRTH
ENSGALP00000024548
C2H2 ZF
213
235
FSCPHCNRAFADRSNLRAHLQTH
ENSGALP00000024548
C2H2 ZF
241
262
YQCKNCSKTFSRMSLLHKHEES
Links
Other
C2H2 ZF
family TFs
Other
Gallus gallus
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAB34088
Xenopus laevis
AAB34088
I
0.825
AAK54135
Xenopus tropicalis
AAK54135
I
0.825
AAK54137
Xenopus laevis
AAK54137
I
0.825
AAK54139
Xenopus laevis
AAK54139
I
0.825
Aan_R012932
Calypte anna
Aan_R012932
I
0.825
Afo_R005870
Aptenodytes forsteri
Afo_R005870
I
0.825
Alligator_sinensis_CCG001703.1
Alligator sinensis
Alligator_sinensis_CCG001703.1
I
0.764
Alligator_sinensis_CCG016283.1
Alligator sinensis
Alligator_sinensis_CCG016283.1
I
0.825
Brh_R006038
Buceros rhinoceros
Brh_R006038
I
0.825
CapteG76255
Capitella teleta
CapteG76255
I
0.767
Cmyd_10017446
Chelonia mydas
Cmyd_10017446
I
0.756
SNAI2
Anolis carolinensis
ENSACAG00000012332
I
0.825
ENSAMEG00000009606
Ailuropoda melanoleuca
ENSAMEG00000009606
I
0.825
ENSAMXG00000011013
Astyanax mexicanus
ENSAMXG00000011013
I
0.783
ENSAPLG00000003920
Anas platyrhynchos
ENSAPLG00000003920
I
0.825
SNAI2
Bos taurus
ENSBTAG00000013227
I
0.813
SNAI2
Canis familiaris
ENSCAFG00000006638
I
0.825
SNAI2
Choloepus hoffmanni
ENSCHOG00000007046
I
0.825
SNAI2
Callithrix jacchus
ENSCJAG00000013499
I
0.825
ENSCPOG00000014827
Cavia porcellus
ENSCPOG00000014827
I
0.825
ENSCSAG00000014787
Chlorocebus sabaeus
ENSCSAG00000014787
I
0.825
snai2
Danio rerio
ENSDARG00000040046
I
0.805
SNAI2
Dasypus novemcinctus
ENSDNOG00000035997
I
0.825
SNAI2
Equus caballus
ENSECAG00000010120
I
0.825
ENSFALG00000005762
Ficedula albicollis
ENSFALG00000005762
I
0.825
SNAI2
Felis catus
ENSFCAG00000015779
I
0.825
SNAI2
Homo sapiens
ENSG00000019549
D
0.825
snai2
Gasterosteus aculeatus
ENSGACG00000017935
I
0.805
SNAI2
Gorilla gorilla
ENSGGOG00000000959
I
0.825
ENSGMOG00000002669
Gadus morhua
ENSGMOG00000002669
I
0.807
ENSLACG00000004705
Latimeria chalumnae
ENSLACG00000004705
I
0.778
ENSLACG00000005413
Latimeria chalumnae
ENSLACG00000005413
I
0.825
SNAI2
Loxodonta africana
ENSLAFG00000009299
I
0.825
ENSLOCG00000004887
Lepisosteus oculatus
ENSLOCG00000004887
I
0.775
ENSLOCG00000005992
Lepisosteus oculatus
ENSLOCG00000005992
I
0.805
ENSMEUG00000009510
Macropus eugenii
ENSMEUG00000009510
I
0.821
SNAI2
Meleagris gallopavo
ENSMGAG00000010813
I
0.825
SNAI2
Microcebus murinus
ENSMICG00000000335
I
0.825
SNAI2
Myotis lucifugus
ENSMLUG00000001086
I
0.825
SNAI2
Macaca mulatta
ENSMMUG00000016195
I
0.825
SNAI2
Monodelphis domestica
ENSMODG00000010173
I
0.825
ENSMPUG00000010793
Mustela putorius furo
ENSMPUG00000010793
I
0.825
Snai2
Mus musculus
ENSMUSG00000022676
D
0.825
ENSNLEG00000013421
Nomascus leucogenys
ENSNLEG00000013421
I
0.825
SNAI2
Ornithorhynchus anatinus
ENSOANG00000007267
I
0.825
ENSOARG00000013030
Ovis aries
ENSOARG00000013030
I
0.813
SNAI2
Oryctolagus cuniculus
ENSOCUG00000012254
I
0.825
SNAI2
Otolemur garnettii
ENSOGAG00000010500
I
0.825
ENSONIG00000009542
Oreochromis niloticus
ENSONIG00000009542
I
0.805
snai2
Oryzias latipes
ENSORLG00000017475
I
0.805
ENSP00000020945-D1
Bos grunniens
ENSP00000020945-D1
I
0.813
ENSP00000380034
Macaca fascicularis
ENSP00000380034
I
0.825
ENSPANG00000017540
Papio anubis
ENSPANG00000017540
I
0.825
SNAI2
Procavia capensis
ENSPCAG00000001788
I
0.825
ENSPFOG00000014336
Poecilia formosa
ENSPFOG00000014336
I
0.805
ENSPPYG00000018578
Pongo abelii
ENSPPYG00000018578
I
0.825
ENSPSIG00000003607
Pelodiscus sinensis
ENSPSIG00000003607
I
0.758
ENSPSIG00000016395
Pelodiscus sinensis
ENSPSIG00000016395
I
0.825
SNAI2
Pan troglodytes
ENSPTRG00000020235
I
0.825
SNAI2
Pteropus vampyrus
ENSPVAG00000009457
I
0.825
Snai2
Rattus norvegicus
ENSRNOG00000047699
I
0.825
ENSSHAG00000004205
Sarcophilus harrisii
ENSSHAG00000004205
I
0.825
ENSSSCG00000024404
Sus scrofa
ENSSSCG00000024404
I
0.817
ENSSSCG00000026570
Sus scrofa
ENSSSCG00000026570
I
0.817
ENSSTOG00000028743
Ictidomys tridecemlineatus
ENSSTOG00000028743
I
0.825
SNAI2
Taeniopygia guttata
ENSTGUG00000010914
I
0.825
snai2
Tetraodon nigroviridis
ENSTNIG00000008504
I
0.805
snai2
Takifugu rubripes
ENSTRUG00000006860
I
0.805
ENSXMAG00000019030
Xiphophorus maculatus
ENSXMAG00000019030
I
0.805
esg
Drosophila melanogaster
FBgn0001981
D
0.767
GA17666
Drosophila pseudoobscura
FBgn0077676
I
0.767
GF15382
Drosophila ananassae
FBgn0092407
I
0.767
GG25158
Drosophila erecta
FBgn0117283
I
0.767
GH13754
Drosophila grimshawi
FBgn0121230
I
0.769
GI17894
Drosophila mojavensis
FBgn0140635
I
0.769
GL26425
Drosophila persimilis
FBgn0164007
I
0.767
GD24004
Drosophila simulans
FBgn0195364
I
0.757
GJ17399
Drosophila virilis
FBgn0204571
I
0.769
GK18133
Drosophila willistoni
FBgn0220132
I
0.769
GE20968
Drosophila yakuba
FBgn0238253
I
0.767
Gfo_R012649
Geospiza fortis
Gfo_R012649
I
0.825
HMEL002306
Heliconius melpomene
HMEL002306
I
0.757
KGM_17970
Danaus plexippus
KGM_17970
I
0.757
L798_10614
Zootermopsis nevadensis
L798_10614
I
0.757
LCUP013268
Lucilia cuprina
LCUP013268
I
0.772
LDEC001157
Leptinotarsa decemlineata
LDEC001157
I
0.769
LotgiG114290
Lottia gigantea
LotgiG114290
I
0.761
MCINX001355
Melitaea cinxia
MCINX001355
I
0.757
MDOA014024
Musca domestica
MDOA014024
I
0.772
Myotis_brandtii_Snai2_10018131
Myotis brandtii
Myotis_brandtii_Snai2_10018131
I
0.825
Ogr04681
Ophisaurus gracilis
Ogr04681
I
0.825
PPAI008011
Phlebotomus papatasi
PPAI008011
I
0.756
Pvit_15376
Pogona vitticeps
Pvit_15376
I
0.825
Sakowv30043351m.g
Saccoglossus kowalevskii
Sakowv30043351m.g
I
0.764
Tal_R003673
Tyto alba
Tal_R003673
I
0.825
TC014474
Tribolium castaneum
TC014474
I
0.767
snai1
Xenopus tropicalis
XB-GENE-479970
I
0.759
snai2
Xenopus tropicalis
XB-GENE-487371
I
0.825
snai2.L
Xenopus laevis
XB-GENE-6255814
I
0.825
snai1.S
Xenopus laevis
XB-GENE-865328
I
0.759
snai2.S
Xenopus laevis
XB-GENE-865699
I
0.825