ZBTB18 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000007968 T103028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000006879 C2H2 ZF 379 401
ENSOCUP00000006879 C2H2 ZF 420 441
ENSOCUP00000006879 C2H2 ZF 447 469
ENSOCUP00000006879 C2H2 ZF 475 498

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00295.1 Alternaria brassicicola AB00295.1 N
COCCADRAFT_99591 Bipolaris zeicola COCCADRAFT_99591 N
COCMIDRAFT_2302 Bipolaris oryzae COCMIDRAFT_2302 N
COCSADRAFT_243580 Bipolaris sorokiniana COCSADRAFT_243580 N
COCVIDRAFT_17516 Bipolaris victoriae COCVIDRAFT_17516 N
estExt_Genewise1.C_11541 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11541 N
LEMA_P079480.1 Leptosphaeria maculans LEMA_P079480.1 N
PTRG_09921 Pyrenophora triticirepentis PTRG_09921 N
PTT_01703 Pyrenophora teres PTT_01703 N
SETTUDRAFT_103147 Setosphaeria turcica SETTUDRAFT_103147 N
SNOG_10764 Stagonospora nodorum SNOG_10764 N
Z518_03482 Rhinocladiella mackenziei Z518_03482 N