CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OVOL2
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000012116
T103091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.825
0.978
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.825
0.978
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.825
0.978
OVOL2
M10207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.825
0.978
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.825
0.978
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.825
0.978
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN
NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.813
0.978
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.770
0.967
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000010420
C2H2 ZF
98
120
HSCDLCGKSFRLQRMLNRHLKCH
ENSOCUP00000010420
C2H2 ZF
126
148
HLCTFCGKGFNDTFDLKRHVRTH
ENSOCUP00000010420
C2H2 ZF
154
177
YKCDVCNKAFTQRCSLESHLKKIH
ENSOCUP00000010420
C2H2 ZF
193
216
YVCEDCGYTGPTQEDLYLHVNSAH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA004880
Anopheles culicifacies
ACUA004880
N
ADIR002704
Anopheles dirus
ADIR002704
N
AFUN009337
Anopheles funestus
AFUN009337
N
AGAP001073
Anopheles gambiae
AGAP001073
N
AMIN005747
Anopheles minimus
AMIN005747
N
AMIN008233
Anopheles minimus
AMIN008233
N