ENSPSIG00000003607 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000003607 T107457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.756 0.895
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.756 0.895
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.756 0.895
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.756 0.895
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.756 0.895
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.756 0.895
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.756 0.895
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.756 0.895
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.756 0.895
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.756 0.895
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.756 0.895
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.756 0.895
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000003802 C2H2 ZF 118 140
ENSPSIP00000003802 C2H2 ZF 149 171
ENSPSIP00000003802 C2H2 ZF 175 197
ENSPSIP00000003802 C2H2 ZF 203 225
ENSPSIP00000003802 C2H2 ZF 231 252

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_023080 Acremonium chrysogenum ACRE_023080 N
CFIO01_03141 Colletotrichum fioriniae CFIO01_03141 N
CH063_03819 Colletotrichum higginsianum CH063_03819 N
CHGG_10305 Chaetomium globosum CHGG_10305 N
CMQ_4400 Grosmannia clavigera CMQ_4400 N
CSUB01_11633 Colletotrichum sublineola CSUB01_11633 N
CTHT_0008850 Chaetomium thermophilum CTHT_0008850 N
estExt_fgenesh1_pg.C_20667 Cryphonectria parasitica estExt_fgenesh1_pg.C_20667 N
estExt_Genewise1Plus.C_sca_11_chr8_3_00004 Nectria haematococca estExt_Genewise1Plus.C_sca_11_chr8_3_00004 N
FFUJ_09747 Fusarium fujikuroi FFUJ_09747 N
FOXG_13954 Fusarium oxysporum FOXG_13954 N
FVEG_11376 Fusarium verticillioides FVEG_11376 N
GLRG_08744 Colletotrichum graminicola GLRG_08744 N
HMPREF1624_08493 Sporothrix schenckii HMPREF1624_08493 N
MYCTH_2312477 Myceliophthora thermophila MYCTH_2312477 N
NechaG71246 Fusarium solani NechaG71246 N
PODANS_6_5270 Podospora anserina PODANS_6_5270 N
S40285_07194 Stachybotrys chlorohalonata S40285_07194 N
S40288_06333 Stachybotrys chartarum S40288_06333 N
SPBR_03635 Sporothrix brasiliensis SPBR_03635 N
UCRPA7_7490 Togninia minima UCRPA7_7490 N
VHEMI04457 Torrubiella hemipterigena VHEMI04457 N