CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF71
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000022542
T108242_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF71
M08383_2.00
Homo sapiens
TTKCYYTYYTYBCYYYKSCYNCYV
BRGNRGSMRRRGVRARRARRGMAA
ChIP-seq
Schmitges et al.(2016)
Q9NQZ8_3-10.RCADE
0.827
1.000
ZNF71
M08267_2.00
Homo sapiens
NAGTTTCRBTTYCY
RGRAAVYGAAACTN
ChIP-seq
Najafabadi et al.(2015b)
ZNF71
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000019860
C2H2 ZF
130
152
YDCSECGKAFSRSSSLIKHQRIH
ENSPTRP00000019860
C2H2 ZF
158
180
FECDTCGKHFIERSSLTIHQRVH
ENSPTRP00000019860
C2H2 ZF
186
208
YACGDCGKAFSQRMNLTVHQRTH
ENSPTRP00000019860
C2H2 ZF
214
236
YVCDVCGKAFRKTSSLTQHERIH
ENSPTRP00000019860
C2H2 ZF
242
264
YACGDCGKAFSQNMHLIVHQRTH
ENSPTRP00000019860
C2H2 ZF
270
292
YVCPECGRAFSQNMHLTEHQRTH
ENSPTRP00000019860
C2H2 ZF
298
320
YACKECGKAFNKSSSLTLHQRNH
ENSPTRP00000019860
C2H2 ZF
326
348
YVCGECGKAFSQSSYLIQHQRFH
ENSPTRP00000019860
C2H2 ZF
354
376
FECSECGKAFSKNSSLTQHQRIH
ENSPTRP00000019860
C2H2 ZF
382
404
YECYICKKHFTGRSSLIVHQIVH
ENSPTRP00000019860
C2H2 ZF
410
432
YVCGECGKAFSQSAYLIEHQRIH
ENSPTRP00000019860
C2H2 ZF
438
460
YRCGQCGKSFIKNSSLTVHQRIH
ENSPTRP00000019860
C2H2 ZF
466
488
YRCGECGKTFSRNTNLTRHLRIH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB009174
Biomphalaria glabrata
BGLB009174
N
Brh_R010198
Buceros rhinoceros
Brh_R010198
N
CRE14814
Caenorhabditis remanei
CRE14814
N
PRDM14
Echinops telfairi
ENSETEG00000012290
N
ENSFALG00000008315
Ficedula albicollis
ENSFALG00000008315
N
ENSGMOG00000016524
Gadus morhua
ENSGMOG00000016524
N
PRDM14
Loxodonta africana
ENSLAFG00000015637
N
ENSOANG00000022146
Ornithorhynchus anatinus
ENSOANG00000022146
N
ENSTGUG00000011457
Taeniopygia guttata
ENSTGUG00000011457
N
prdm14
Takifugu rubripes
ENSTRUG00000011758
N
HCOI00592400
Haemonchus contortus
HCOI00592400
N
HPLM_0001086701
Haemonchus placei
HPLM_0001086701
N
NBR_0001957501
Nippostrongylus brasiliensis
NBR_0001957501
N
nDi.2.2.2.g10196
Dirofilaria immitis
nDi.2.2.2.g10196
N
Pvit_15018
Pogona vitticeps
Pvit_15018
N
SBAD_0000104601
Soboliphyme baturini
SBAD_0000104601
N
SMU15027586
Schmidtea mediterranea
SMU15027586
N
SVUK_0000940401
Strongylus vulgaris
SVUK_0000940401
N
TMUE_s0104004100
Trichuris muris
TMUE_s0104004100
N
F47E1.3
Caenorhabditis elegans
WBGene00018567
N