CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fezf1
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000016410
T112463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.825
0.978
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.825
0.978
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.804
0.891
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.804
0.891
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.804
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000041953
C2H2 ZF
244
266
FTCEVCGKVFNAHYNLTRHMPVH
ENSTRUP00000041953
C2H2 ZF
272
294
FVCKVCGKGFRQASTLCRHKIIH
ENSTRUP00000041953
C2H2 ZF
300
322
HKCNQCGKAFNRSSTLNTHTRIH
ENSTRUP00000041953
C2H2 ZF
328
350
FVCEFCGKGFHQKGNYKNHKLTH
ENSTRUP00000041953
C2H2 ZF
356
378
FKCSICSKAFHQVYNLTFHMHTH
ENSTRUP00000041953
C2H2 ZF
384
407
FTCPTCGKGFCRNFDLKKHIRKLH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_00250
Echinococcus canadensis
ECANG7_00250
N
EmuJ_000432600
Echinococcus multilocularis
EmuJ_000432600
N
TsM_000603900
Taenia solium
TsM_000603900
N