CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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br
(
Drosophila melanogaster
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0000210
T114387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
br
M06028_2.00
Drosophila melanogaster
MACTATY
RATAGTK
B1H
Zhu et al.(2011)
br-PA_SANGER_5_FBgn0000210
(Direct)
(Direct)
br
M06029_2.00
Drosophila melanogaster
RWHYNWCTAAYG
CRTTAGWNRDWY
B1H
Zhu et al.(2011)
br-PE_SANGER_5_FBgn0000210
(Direct)
(Direct)
br
M06030_2.00
Drosophila melanogaster
TGVTCTHKK
MMDAGABCA
B1H
Zhu et al.(2011)
br-PL_SANGER_5_FBgn0000210
(Direct)
(Direct)
br
M06031_2.00
Drosophila melanogaster
TCTAATC
GATTAGA
B1H
Zhu et al.(2011)
br_SANGER_10_FBgn0000210
(Direct)
(Direct)
br
M06032_2.00
Drosophila melanogaster
YDTCTAATCDN
NHGATTAGAHR
B1H
Zhu et al.(2011)
br_SOLEXA_10_FBgn0000210
(Direct)
(Direct)
br
M06033_2.00
Drosophila melanogaster
TKVTAWTT
AAWTABMA
B1H
Zhu et al.(2011)
br-Z1_FlyReg_FBgn0000210
(Direct)
(Direct)
br
M06034_2.00
Drosophila melanogaster
WCTAKBWH
DWVMTAGW
B1H
Zhu et al.(2011)
br-Z2_FlyReg_FBgn0000210
(Direct)
(Direct)
br
M06035_2.00
Drosophila melanogaster
AMHARYTN
NARYTDKT
B1H
Zhu et al.(2011)
br-Z3_FlyReg_FBgn0000210
(Direct)
(Direct)
br
M06036_2.00
Drosophila melanogaster
ATTAKY
RMTAAT
B1H
Zhu et al.(2011)
br-Z4_FlyReg_FBgn0000210
(Direct)
(Direct)
br
M08446_2.00
Drosophila melanogaster
NWYTTGTYWWTKAY
RTMAWWRACAARWN
COMPILED
Mathelier et al.(2014)
MA0010.1
(Direct)
(Direct)
br
M08447_2.00
Drosophila melanogaster
WHCTAKTY
RAMTAGDW
COMPILED
Mathelier et al.(2014)
MA0011.1
(Direct)
(Direct)
br
M08448_2.00
Drosophila melanogaster
NNHYTWGTTTW
WAAACWARDNN
COMPILED
Mathelier et al.(2014)
MA0012.1
(Direct)
(Direct)
br
M08449_2.00
Drosophila melanogaster
WTWNTTTAYWW
WWRTAAANWAW
COMPILED
Mathelier et al.(2014)
MA0013.1
(Direct)
(Direct)
br
M10365_2.00
Drosophila melanogaster
DNBDDWHCTATTYNKY
RMNAAATAGDWHHVNH
Transfac
Matys et al.(2006)
I$BRCZ2_01
(Direct)
(Direct)
br
M10366_2.00
Drosophila melanogaster
DNNHYTWGTTTWNHN
NDNWAAACWARDNNH
Transfac
Matys et al.(2006)
I$BRCZ3_01
(Direct)
(Direct)
br
M10367_2.00
Drosophila melanogaster
WTWWSTTTMYWWW
WWWRKAAASAWAW
Transfac
Matys et al.(2006)
I$BRCZ4_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BRC1_DROME
M10097_2.00
Drosophila melanogaster
BDNWYTTGTYWWTKAYHW
WDRTMAWWRACAARWNHV
Transfac
Matys et al.(2006)
I$BRCZ1_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0070252
C2H2 ZF
633
656
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0070252
C2H2 ZF
664
686
VCNICKRVYSSLNSLRNHKSIYH
FBpp0070255
C2H2 ZF
587
610
QECPYCRRTFSCYYSLKRHFQDKH
FBpp0070255
C2H2 ZF
617
640
YVCEFCHRRYRTKNSLTTHKSLQH
FBpp0070256
C2H2 ZF
572
595
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0070256
C2H2 ZF
603
625
VCNICKRVYSSLNSLRNHKSIYH
FBpp0289658
C2H2 ZF
439
462
FSCQLCGKLLCSKASLKRHIADKH
FBpp0289658
C2H2 ZF
469
492
YRCAICERVYCSRNSLMTHIYTYH
FBpp0292595
C2H2 ZF
439
462
FSCQLCGKLLCSKASLKRHIADKH
FBpp0292595
C2H2 ZF
469
492
YRCAICERVYCSRNSLMTHIYTYH
FBpp0292596
C2H2 ZF
633
656
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0292596
C2H2 ZF
664
686
VCNICKRVYSSLNSLRNHKSIYH
FBpp0292597
C2H2 ZF
633
656
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0292597
C2H2 ZF
664
686
VCNICKRVYSSLNSLRNHKSIYH
FBpp0300638
C2H2 ZF
572
595
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0300638
C2H2 ZF
603
625
VCNICKRVYSSLNSLRNHKSIYH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila melanogaster
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB008849
Anopheles albimanus
AALB008849
I
0.802
AARA006778
Anopheles arabiensis
AARA006778
N
0.822
AARA006779
Anopheles arabiensis
AARA006779
N
0.827
ACEP24927
Atta cephalotes
ACEP24927
N
0.798
ACEP24929
Atta cephalotes
ACEP24929
N
0.827
ACHR009670
Anopheles christyi
ACHR009670
I
0.802
ACOM042119
Anopheles coluzzii
ACOM042119
N
0.822
ACOM042123
Anopheles coluzzii
ACOM042123
N
0.827
ACUA025979
Anopheles culicifacies
ACUA025979
I
0.802
ADAC009993
Anopheles darlingi
ADAC009993
N
0.827
ADIR009007
Anopheles dirus
ADIR009007
N
0.822
ADIR009008
Anopheles dirus
ADIR009008
N
0.827
AEPI002762
Anopheles epiroticus
AEPI002762
N
0.822
AEPI002763
Anopheles epiroticus
AEPI002763
N
0.827
AFAF016384
Anopheles farauti
AFAF016384
N
0.827
AFUN005064
Anopheles funestus
AFUN005064
N
0.827
AFUN005065
Anopheles funestus
AFUN005065
N
0.788
AGAP002163
Anopheles gambiae
AGAP002163
N
0.827
AGAP002164
Anopheles gambiae
AGAP002164
N
0.822
AMAM014509
Anopheles maculatus
AMAM014509
N
0.827
AMAM022001
Anopheles maculatus
AMAM022001
I
0.802
AMEC005709
Anopheles melas
AMEC005709
I
0.802
AMEC016444
Anopheles melas
AMEC016444
N
0.827
AMEM001056
Anopheles merus
AMEM001056
N
0.827
AMEM017224
Anopheles merus
AMEM017224
I
0.802
AMIN003104
Anopheles minimus
AMIN003104
N
0.822
AMIN003105
Anopheles minimus
AMIN003105
N
0.827
AQUA008618
Anopheles quadriannulatus
AQUA008618
N
0.827
AQUA008619
Anopheles quadriannulatus
AQUA008619
N
0.822
ASIS009720
Anopheles sinensis
ASIS009720
I
0.802
BGIBMGA009909
Bombyx mori
BGIBMGA009909
N
0.827
BRC1_DROME
Drosophila melanogaster
BRC1_DROME
D
0.827
Cflo_02153--NP_001035356.1_APIME
Camponotus floridanus
Cflo_02153--NP_001035356.1_APIME
I
0.798
Cflo_02155--NP_001035356.1_APIME
Camponotus floridanus
Cflo_02155--NP_001035356.1_APIME
N
0.798
Cflo_02156--NP_001035356.1_APIME
Camponotus floridanus
Cflo_02156--NP_001035356.1_APIME
N
0.827
CPIJ003270
Culex quinquefasciatus
CPIJ003270
N
0.822
CPIJ003271
Culex quinquefasciatus
CPIJ003271
N
0.827
CpipJ_CPIJ003270
Culex pipiens
CpipJ_CPIJ003270
N
0.822
CpipJ_CPIJ003271
Culex pipiens
CpipJ_CPIJ003271
N
0.827
GG12867
Drosophila erecta
FBgn0105142
I
0.827
GG12869
Drosophila erecta
FBgn0105144
N
0.827
GI16492
Drosophila mojavensis
FBgn0139240
N
0.827
GI16494
Drosophila mojavensis
FBgn0139242
N
0.827
GM19154
Drosophila sechellia
FBgn0174056
I
0.827
GD24719
Drosophila simulans
FBgn0196042
N
0.827
GE16699
Drosophila yakuba
FBgn0234196
N
0.827
GE16700
Drosophila yakuba
FBgn0234197
N
0.827
GB48273
Apis mellifera
GB48273
N
0.827
HHAL005051-PA
Halyomorpha halys
HHAL005051-PA
N
0.792
HMEL012334
Heliconius melpomene
HMEL012334
N
0.827
Hsal_01159--NP_001035356.1_APIME
Harpegnathos saltator
Hsal_01159--NP_001035356.1_APIME
N
0.827
Hsal_01160--NP_001035356.1_APIME
Harpegnathos saltator
Hsal_01160--NP_001035356.1_APIME
N
0.798
KGM_00053
Danaus plexippus
KGM_00053
N
0.827
L798_01786
Zootermopsis nevadensis
L798_01786
N
0.798
LCUP011136
Lucilia cuprina
LCUP011136
N
0.827
LDEC009788
Leptinotarsa decemlineata
LDEC009788
N
0.827
LLOJ000809
Lutzomyia longipalpis
LLOJ000809
N
0.827
MDOA002234
Musca domestica
MDOA002234
N
0.827
MDOA005579
Musca domestica
MDOA005579
I
0.822
MDOA006186
Musca domestica
MDOA006186
N
0.822
MDOA014444
Musca domestica
MDOA014444
I
0.822
NV15003
Nasonia vitripennis
NV15003
N
0.827
PHUM258420
Pediculus humanus
PHUM258420
N
0.793
PPAI010690
Phlebotomus papatasi
PPAI010690
N
0.827
RPRC003967
Rhodnius prolixus
RPRC003967
N
0.792
SINV21863
Solenopsis invicta
SINV21863
N
0.827
TC005475
Tribolium castaneum
TC005475
N
0.798
TC005476
Tribolium castaneum
TC005476
N
0.827