GG10437 (Drosophila erecta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0102746 T115015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.827 1.000
GFI1B
M00240_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_REF 		0.782 0.833
GFI1B
M04523_2.00 		Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX 		0.782 0.833
Gfi1b
M08098_2.00 		Mus musculus
MAATCWCWGCH
DGCWGWGATTK		 ChIP-seq
Mathelier et al.(2014)
MA0483.1 		0.782 0.833
GFI1B
M08909_2.00 		Homo sapiens
MAATCWSDGY
RCHSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A 		0.782 0.833
Gfi1b
M08977_2.00 		Mus musculus
MAAYCACWGH
DCWGWGRTTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A 		0.782 0.833
Gfi1b
M09514_2.00 		Mus musculus
MAATCWSWGC
GCWSWGATTK		 Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178 		0.782 0.833
GFI1B
M10243_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_01 		0.782 0.833
GFI1B
M10244_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_Q6 		0.782 0.833
GFI1B
M00239_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_A204T 		0.782 0.833
GFI1B
M04524_2.00 		Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX 		0.782 0.833
GFI1
M00238_2.00 		Homo sapiens
NWAWMNNNN
NNNNKWTWN		 PBM
Barrera et al.(2016)
GFI1_REF 		0.774 0.848
GFI1
M04507_2.00 		Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV		 SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX 		0.774 0.848
Gfi1
M02668_2.00 		Rattus norvegicus
NMAATCWVHS
SDBWGATTKN		 SELEX
Mathelier et al.(2014)
MA0038.1 		0.774 0.848
GFI1
M08905_2.00 		Homo sapiens
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C 		0.774 0.848
Gfi1
M08984_2.00 		Mus musculus
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C 		0.774 0.848
GFI1
M10235_2.00 		Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN		 Transfac
Matys et al.(2006)
V$GFI1_01 		0.774 0.848
GFI1
M10236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1_Q6_01 		0.774 0.848
GFI1
M04508_2.00 		Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN		 SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX 		0.774 0.848
GFI1
M00236_2.00 		Homo sapiens
NAATMNNNN
NNNNKATTN		 PBM
Barrera et al.(2016)
GFI1_L400F 		0.772 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0128983 C2H2 ZF 515 539
FBpp0128983 C2H2 ZF 544 566
FBpp0128983 C2H2 ZF 572 594
FBpp0128983 C2H2 ZF 600 622
FBpp0128983 C2H2 ZF 628 650
FBpp0128983 C2H2 ZF 656 679

Links

Other C2H2 ZF family TFs
Other Drosophila erecta TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
E(spl)m5-HLH Drosophila melanogaster FBgn0002631 D
GA19349 Drosophila pseudoobscura FBgn0079346 I
HLHm5 Drosophila simulans FBgn0082735 I
GG12204 Drosophila erecta FBgn0104496 I
GH18145 Drosophila grimshawi FBgn0125613 I
GI22907 Drosophila mojavensis FBgn0145634 I
GL22018 Drosophila persimilis FBgn0159611 I
GJ23319 Drosophila virilis FBgn0210420 I
GK12804 Drosophila willistoni FBgn0214813 I
GE10648 Drosophila yakuba FBgn0228500 I
LCUP008815 Lucilia cuprina LCUP008815 N
LCUP008816 Lucilia cuprina LCUP008816 N
LCUP008817 Lucilia cuprina LCUP008817 N
MDOA001197 Musca domestica MDOA001197 I
MDOA002503 Musca domestica MDOA002503 I
MDOA005565 Musca domestica MDOA005565 I
MDOA006623 Musca domestica MDOA006623 I
MDOA006982 Musca domestica MDOA006982 I
MDOA007465 Musca domestica MDOA007465 I
MDOA007762 Musca domestica MDOA007762 I
MDOA008483 Musca domestica MDOA008483 I
MDOA011218 Musca domestica MDOA011218 I
MDOA012696 Musca domestica MDOA012696 I
MDOA013683 Musca domestica MDOA013683 I